Job Description P61887 Confidence 90.42% Date Thu Jan 5 12:07:25 GMT 2012 Rank 80 Aligned Residues 170 % Identity 14% Template c3cgxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative nucleotide-diphospho-sugar transferase; PDBTitle: crystal structure of putative nucleotide-diphospho-sugar transferase2 (yp_389115.1) from desulfovibrio desulfuricans g20 at 1.90 a3 resolution Resolution 1.90 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y	A	E	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	.	.	.	N	G	E	P	S	C	L	V	L	G	D	N
Query Conservation																																																																			.	.	.
Alig confidence																											.	.	.	.	.																																				.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		F	V	Q	D	X	L	Q	G	L	A	R	L	H	A	D	L	H	I	C	Y	V	P	G	D	A	.	.	.	.	.	D	L	P	E	K	F	K	A	W	L	G	P	Q	H	X	F	A	A	Q	Q	G	L	D	L	G	E	R	X	K	H	A	X	Q	K	A	F	D	D	G	Y	D	R	V	V	L	X	G	S	D	I
Template Known Secondary structure											T	T	S	S	S											T	.	.	.	.	.	T											T	T	S							S	S	S															T	T		S							S	S
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	F	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	V	E	F	D	D	N	F	R	A	I	S	L	E	E	K	P	K	Q	P	K	S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K
Query Conservation		.
Alig confidence		.															.	.									.	.	.	.	.	.				.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																	.	.									.	.	.	.	.	.				.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		P	D	Y	P	C	E	L	V	Q	K	A	L	N	D	L	.	.	Q	H	Y	D	A	A	I	G	.	.	.	.	.	.	P	A	F	.	.	.	.	.	.	D	G	G	Y	Y	L	I	G	F	R	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	C	P	D	V	F	D	G	I	.	.	.	.
Template Known Secondary structure		T	T													T	.	.	T	T		S					.	.	.	.	.	.		B	T	.	.	.	.	.	.	T	S	S								G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G			G	G	G	G	T	T		.	.	.	.
Template Predicted Secondary structure																	.	.									.	.	.	.	.	.				.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.							.	.	.							.	140	.	.	.	.	.	.	.	.	.	150															.	.	.	.	.	.	.	.	.	160
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	E	R	G	E	L	E	I	T	S	I	N	Q	M	Y	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F	A	W	L	D	T	G	T	H	D	S	L	I	E	A	S	T	F	V	Q	T	V	E	K	R	Q
Query Conservation
Alig confidence		.																				.									.	.	.
Template Conservation		.																				.									.	.	.
Template Sequence		.	R	W	G	E	A	D	V	Y	Q	P	T	V	E	K	X	R	R	A	R	.	L	E	V	L	Q	L	P	D	.	.	.	W	N	D	V	D	T	V	W	D	L	N	V	L	Y	R	T	N	K	N	S	S	F	R	R
Template Known Secondary structure		.		T	T	T	S													T	T	.									.	.	.	B					S												T	T	S	G	G	G	G
Template Predicted Secondary structure		.																				.									.	.	.
Template SS confidence
			161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions