Job Description P61887 Confidence 100.00% Date Thu Jan 5 12:07:25 GMT 2012 Rank 16 Aligned Residues 233 % Identity 23% Template c3brkX_ PDB info PDB header:transferase Chain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase; PDBTitle: crystal structure of adp-glucose pyrophosphorylase from2 agrobacterium tumefaciens Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.
Predicted Secondary structure																																		.																																								.	.	.	.	.
Query SS confidence																																		.																																								.	.	.	.	.
Query Sequence		M	K	G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	Y	D	K	P	.	M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	.	.	.	.	.	G	I	Q
Query Conservation																																		.																																								.	.	.	.	.
Alig confidence																																		.																								.																.	.	.	.	.
Template Conservation																																																										.
Template Sequence		A	X	A	Y	V	L	A	G	G	R	G	S	R	L	K	E	L	T	D	R	R	A	K	P	A	V	Y	F	G	G	K	A	R	I	I	D	F	A	L	S	N	A	L	N	S	G	I	R	R	I	G	V	A	T	Q	Y	.	K	A	H	S	L	I	R	H	L	Q	R	G	W	D	F	F	R	P	E	R	N	E	S
Template Known Secondary structure													G	G	G	G	G	G	G	S	S	S		G	G	G	S			T	T	T			T											T	T										T	.	T												S					G	G	G	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.																																										.	.
Query SS confidence																									.	.	.																																										.	.
Query Sequence		L	E	Y	A	E	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	.	.	.	N	G	E	P	S	C	L	V	L	G	D	N	I	F	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	.	.	D	P	E	R	F	G	V	V	E	F	D
Query Conservation																									.	.	.																																										.	.
Alig confidence																									.	.	.															.																											.	.
Template Conservation																																										.
Template Sequence		F	D	I	L	P	A	S	W	Y	E	G	T	A	D	A	V	Y	Q	N	I	D	I	I	E	P	Y	A	P	E	Y	X	V	I	L	A	G	D	H	I	Y	.	K	X	D	Y	E	Y	X	L	Q	Q	H	V	D	S	G	A	D	V	T	I	G	C	L	E	V	P	R	X	E	A	T	G	F	G	V	X	H	V	N
Template Known Secondary structure																			T	T										S							S	S				.		B		T										T	T		S										T	T	G	G	G	G	S
Template Predicted Secondary structure																																										.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.																																	.	.	.
Query SS confidence																				.	.	.	.	.	.	.																																	.	.	.
Query Sequence		D	N	F	R	A	I	S	L	E	E	K	P	K	Q	P	K	S	N	.	.	.	.	.	.	.	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E	I	T	S	.	.	.	I	N	Q	M	Y	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F
Query Conservation																				.	.	.	.	.	.	.																																	.	.	.
Alig confidence																				.	.	.	.	.	.	.																																	.	.	.											.	.
Template Conservation																																																																								.	.
Template Sequence		E	K	D	E	I	I	D	F	I	E	K	P	A	D	P	P	G	I	P	G	N	E	G	F	A	L	A	S	X	G	I	Y	V	F	H	T	K	F	L	X	E	A	V	R	R	D	A	A	D	I	I	P	Y	I	V	E	H	G	K	A	V	A	H	R	F	A	D	S	C	V	.	.	R	S	D	F	E	H	E	P
Template Known Secondary structure		T	T	S	B							S		S	S				B	T	T	B	T	T																					T	S	S					T	T						S											B		.	.			T	T		S	S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	L	D	T	G	T	H	D	S	L	I	E	A	S	T	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	W	R	D	V	G	T	I	D	A	Y	W	Q	A	N	I	D	L
Template Known Secondary structure								S											T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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