Job Description P61887 Confidence 98.80% Date Thu Jan 5 12:07:25 GMT 2012 Rank 66 Aligned Residues 191 % Identity 19% Template c2yqsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine pyrophosphorylase; PDBTitle: crystal structure of uridine-diphospho-n-acetylglucosamine2 pyrophosphorylase from candida albicans, in the product-binding form Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.														.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	Y	.	.	.	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G
Query Conservation																													.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.												.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		V	L	L	M	A	G	G	Q	G	T	R	L	G	.	.	.	S	S	A	P	K	G	C	F	N	I	E	L	P	S	Q	K	S	L	F	Q	I	Q	A	E	K	I	L	K	I	E	Q	L	A	Q	Q	Y	L	K	S	T	K	K	P	I	I	N	W	Y	I	M	T	S	G	P	T	R	N	A	T	E	S	F	F	I
Template Known Secondary structure											G	G	G	T	.	.	.		S	S		G	G	G						T	T																								T		S	S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		67	.	.	70	.	.	.																										.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		D	G	S	E	F	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	E	Y	A	E	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	.	.	.	.	.	.	.	.	L	N	G	E	P	S	C	L	V	L	G	D	N	I	F	F	G
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	N	N	Y	F	G	L	N	S	H	Q	V	I	F	F	N	Q	G	T	L	P	C	F	N	L	Q	G	N	K	I	L	L	E	L	K	N	S	I	C	Q	S	P	D	G	N	G	G	L	Y	K	A	L	K	D	N	G	I	L	D	D	L	N	S	K	G	I	K	H	I	H	M	Y	C	V	D	N	C	L	V	K
Template Known Secondary structure			T	G	G	G	G	S		G	G	G														T	T	S	S	S	B					T	T									G	G	G								T	T									T									T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.																.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																													.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	.	E	R	F	G	V	V	E	F	D	D	N	F	R	A	I	S	L	E	E	K	P	K	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	N	W	A	V	T	G	L	Y	F	Y	D
Query Conservation																													.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	D	P	I	F	I	G	F	A	I	A	K	K	F	D	L	A	T	K	V	V	R	K	R	D	A	N	E	S	V	G	L	I	V	L	D	Q	D	N	Q	K	P	C	V	I	E	Y	S	E	I	S	Q	E	L	A	N	K	K	D	P	Q	D	S	S	K	L	F	L	R	A	A	N	I	V	N	H	Y	Y	S
Template Known Secondary structure		T	T												T		S									S	S	T	T		S								T	T	T	T							G	G	G	S										T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	F	L	N	K	M	I	P	K	W	I	S	S	Q	K	Y	L	P
Template Known Secondary structure													T	T		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions