Job Description P61887 Confidence 100.00% Date Thu Jan 5 12:07:25 GMT 2012 Rank 12 Aligned Residues 229 % Identity 21% Template c2x5sB_ PDB info PDB header:transferase Chain: B: PDB Molecule:mannose-1-phosphate guanylyltransferase; PDBTitle: crystal structure of t. maritima gdp-mannose2 pyrophosphorylase in apo state. Resolution 2.35 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																			.														.														.
Query SS confidence																			.														.														.
Query Sequence		M	K	G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	.	T	R	G	V	S	K	Q	L	L	P	I	Y	D	.	K	P	M	I	Y	Y	P	L	S	V	L	M	L	.	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y
Query Conservation																			.														.														.
Alig confidence																			.														.														.																											.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		M	K	A	L	I	L	A	G	G	S	G	E	R	F	W	P	L	S	T	P	E	T	P	K	Q	F	L	K	L	F	G	N	K	S	L	M	R	W	T	F	E	R	V	L	E	E	M	D	P	K	D	V	I	V	V	T	H	K	D	Y	V	E	R	T	K	K	E	L	P	E	L	P	.	.	.	.	D	E	N	I
Template Known Secondary structure												G	G	G	G	T	T	T		B	T	T	B		G	G	G				B	T	T	B											T	T	T			G	G	G																		T	T	S		.	.	.	.	G	G	G
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																						.															.	.	.	.	.
Query SS confidence																						.															.	.	.	.	.
Query Sequence		A	E	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	.	N	G	E	P	S	C	L	V	L	G	D	N	I	F	.	.	.	.	.	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	V	E	F	D	D	N
Query Conservation																						.															.	.	.	.	.
Alig confidence																						.															.	.	.	.	.
Template Conservation
Template Sequence		I	A	E	P	M	K	K	N	T	A	P	A	C	F	I	G	T	K	L	A	D	D	D	E	P	V	L	V	L	P	A	D	H	R	I	P	D	T	K	K	F	W	K	T	V	K	K	A	L	D	A	L	E	K	Y	D	G	L	F	T	F	G	I	V	P	T	R	P	E	T	G	Y	G	Y	I	E	I	G	E	E
Template Known Secondary structure					S	S													T	T	S		T	T								S	S		B																							S									S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
							152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.										190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																	.	.	.	.	.	.	.	.													.											.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence		.	.	.	.	.																	.	.	.	.	.	.	.	.													.											.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		.	.	.	.	.	F	R	A	I	S	L	E	E	K	P	K	Q	P	K	S	N	.	.	.	.	.	.	.	.	W	A	V	T	G	L	Y	F	Y	D	S	K	.	V	V	E	Y	A	K	Q	V	K	P	.	.	.	.	.	.	.	.	.	S	E	R	G	E	L	E	I	T	S	I	N	Q	M	Y	.	.	.	.
Query Conservation		.	.	.	.	.																	.	.	.	.	.	.	.	.													.											.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence		.	.	.	.	.																	.	.	.	.	.	.	.	.													.											.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		L	E	E	G	V	H	K	V	A	Q	F	R	E	K	P	D	L	E	T	A	K	K	F	V	E	S	G	R	F	L	W	N	S	G	M	F	L	W	K	A	R	E	F	I	E	E	V	K	V	C	E	P	S	I	Y	E	N	L	K	D	V	D	P	R	N	F	E	E	L	K	K	A	Y	E	K	V	P	S	I	S
Template Known Secondary structure				T	T										S													T																																T	T			S	S												S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
							205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F	A	W	L	D	T	G	T	H	D	S	L	I	E	A	S
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.							.
Template Conservation													.
Template Sequence		V	D	Y	A	V	M	E	K	S	K	K	.	V	R	V	V	K	A	D	F	E	W	S	D	L	G	N	W	S	S	V	R	E	I	E
Template Known Secondary structure						T	T	T	T		S		.								S			B				S
Template Predicted Secondary structure													.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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