Job Description P61887 Confidence 99.83% Date Thu Jan 5 12:07:25 GMT 2012 Rank 56 Aligned Residues 199 % Identity 13% Template c2px7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from thermus thermophilus hb8 Resolution 2.20 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		M	K	.	.	G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	Y	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L	E	Y	A
Query Conservation				.	.
Alig confidence				.	.									.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	E	V	S	V	L	I	P	A	A	G	G	.	.	.	.	.	.	.	.	.	.	.	P	K	A	F	L	Q	V	G	G	R	T	L	L	E	W	T	L	A	A	F	R	D	A	A	E	V	L	V	A	L	P	P	G	A	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	G	L	G	A	V
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.		G	G	G		B		S	S	S	B									T	T	T		S								T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.												.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.															.	50	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		E	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	N	G	E	P	S	C	L	V	L	G	D	N	.	I	F	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	V	E	F	D	D	N	F	R	A	I	S	L
Query Conservation																																	.
Alig confidence																																	.																									.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.
Template Sequence		F	L	E	G	G	A	T	R	Q	A	S	V	A	R	L	L	E	A	A	S	L	P	L	V	L	V	H	D	V	A	R	P	F	V	S	R	G	L	V	A	R	V	L	E	A	A	Q	R	S	G	A	A	V	P	V	L	.	.	.	.	.	.	.	P	V	P	D	T	L	M	A	P	E	G	E	A	Y	G	R	V
Template Known Secondary structure							S	S														S	S							T	T																				S							.	.	.	.	.	.	.				S							S	S	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	K	P	K	Q	P	K	S	N	W	A	V	T	G	L	Y	F	Y	D	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	L	E	I	T	S	I	N	Q	M	Y	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F	A	W	L	D	T	G	T	H	D	S	L	I	E	A	S	T	F	V
Query Conservation
Alig confidence			.	.	.	.																									.	.																							.
Template Conservation			.	.	.	.																									.	.																							.
Template Sequence		V	.	.	.	.	P	R	E	A	F	R	L	V	Q	T	P	Q	G	F	F	T	A	L	L	R	E	A	H	A	.	.	Y	A	R	R	K	G	L	E	A	S	D	D	A	Q	L	V	Q	A	L	G	Y	P	.	V	A	L	V	E	G	E	A	T	A	F	K	I	T	H	P	Q	D	L	V	L	A	E	A	L	A
Template Known Secondary structure			.	.	.	.		G	G	G						S															.	.						T				S	S								T	T			.								T	T						S
Template Predicted Secondary structure			.	.	.	.																									.	.																							.
Template SS confidence
		136					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		238
Predicted Secondary structure
Query SS confidence
Query Sequence		Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		209

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions