Job Description P61887 Confidence 98.50% Date Thu Jan 5 12:07:25 GMT 2012 Rank 70 Aligned Residues 178 % Identity 14% Template c2oefA_ PDB info PDB header:transferase Chain: A: PDB Molecule:utp-glucose-1-phosphate uridylyltransferase 2, PDBTitle: open and closed structures of the udp-glucose2 pyrophosphorylase from leishmania major Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																												.																.	.	.	.					.																											.	.	.
Query SS confidence																												.																.	.	.	.					.																											.	.	.
Query Sequence		G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	T	R	G	V	S	K	Q	L	L	P	I	.	Y	D	K	P	M	I	Y	Y	P	L	S	V	L	M	L	.	.	.	.	A	G	I	R	.	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	.	.	.
Query Conservation																												.																.	.	.	.					.																											.	.	.
Alig confidence															.	.	.											.																.	.	.	.					.																											.	.	.
Template Conservation															.	.	.
Template Sequence		V	L	K	L	N	G	G	L	G	T	G	X	G	.	.	.	L	C	D	A	K	T	L	L	E	V	K	D	G	K	T	F	L	D	F	T	A	L	Q	V	Q	Y	L	R	Q	H	C	S	E	H	L	R	F	X	L	X	D	S	F	N	T	S	A	S	T	K	S	F	L	K	A	R	Y	P	W	L	Y	Q	V	F
Template Known Secondary structure									B	S	G	G	G	T	.	.	.			S	B	G	G	G	S				T	T																		T		T	T									T	T	T																	T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
																										74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	E	Y	A	E	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	.	.	.	.	.	.	.	.	L	N	G	E	P	S	C	L	V	L	G	D	N	I	F	F	G	Q	G	F	S	P	K	L	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.														.
Template Conservation																																																																						.
Template Sequence		D	S	E	V	E	L	X	Q	N	Q	V	P	K	I	L	Q	D	T	L	E	P	A	A	W	A	E	N	P	A	Y	E	W	A	P	P	G	H	G	D	I	Y	T	A	L	Y	G	S	G	K	L	Q	E	L	V	E	Q	G	Y	R	Y	X	F	V	S	N	G	D	N	.	L	G	A	T	I	D	K	R	V	L	A
Template Known Secondary structure					T												T	T	T		S	B				T	T		G	G	G	G						T	T									T	S								T	T									T	T	B	.	T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.									.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		H	V	A	A	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	V	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	N	F	R	A	I	S	L	E	E	K	P	K	Q	P	.	.	.	.	.	.	.	.	K	S	N	W	A	V	T	G	L	Y	F	Y	D
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	X	E	K	E	K	I	D	F	L	X	E	V	C	R	R	T	E	S	D	K	K	G	G	H	L	A	R	Q	T	V	Y	V	K	G	K	D	G	Q	P	D	A	E	K	R	V	L	L	L	R	E	S	A	Q	C	P	K	A	D	X	E	S	F	Q	D	I	N	K	Y	S	F	F	N	T	N	N	L	W	I	R
Template Known Secondary structure							T		S										G	G	G	T	T	S														S	S	S													S	T	T	S		T	T	T							T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		178	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	V	V	E	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	V	L	L	E	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions