Return to main results Retrieve Phyre Job Id

Job DescriptionP61887
Confidence97.29%DateThu Jan 5 12:07:25 GMT 2012
Rank72Aligned Residues190
% Identity15%Templatec2d7iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LPIYDKP. . MIYYPLSVLMLAGIR. . . . EILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETFLNG
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Template Sequence  IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREGLIRTRMLGASVATG
Template Known Secondary structure  SS

S
GGG
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GGGTTTSTT
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S
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Query Sequence  EPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDPERFGVVEFDDNFRAISL. . . . . . EEKPKQP. . . . . . . . .
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Template Sequence  DVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSD
Template Known Secondary structure  S

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Query Sequence  . . KSNWAVTGLYFYDSKVVEYAKQVKPSERG. ELEITSINQMYLEAGNLTVELL
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Template Sequence  PFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIP
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SSSTTSS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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