Job Description P61887 Confidence 100.00% Date Thu Jan 5 12:07:25 GMT 2012 Rank 14 Aligned Residues 226 % Identity 22% Template c2cu2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative mannose-1-phosphate guanylyl transferase; PDBTitle: crystal structure of mannose-1-phosphate geranyltransferase from2 thermus thermophilus hb8 Resolution 2.20 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure				.	.																.														.														.
Query SS confidence				.	.																.														.														.
Query Sequence		M	K	.	.	G	I	I	L	A	G	G	S	G	T	R	L	H	P	I	.	T	R	G	V	S	K	Q	L	L	P	I	Y	D	.	K	P	M	I	Y	Y	P	L	S	V	L	M	L	.	A	G	I	R	E	I	L	I	I	T	T	P	E	D	K	G	Y	F	Q	R	L	L	G	D	G	S	E	F	G	I	Q	L
Query Conservation				.	.																.														.														.
Alig confidence				.	.																.														.														.																									.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.
Template Sequence		M	K	T	Y	A	L	V	M	A	G	G	R	G	E	R	L	W	P	L	S	R	E	D	R	P	K	P	F	L	P	L	F	E	G	K	T	L	L	E	A	T	L	E	R	L	A	P	L	V	P	P	E	R	T	L	L	A	V	R	R	D	Q	E	A	V	A	R	P	Y	A	D	G	.	.	.	.	.	.	.	I
Template Known Secondary structure															G	G	G	T	T	T		B	T	T	B		G	G	G		B		G	G	G		B										T	T	T	S		G	G	G							G	G	G					G	G	G		S	S	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.															.															.	.	.
Query SS confidence																								.	.	.															.															.	.	.
Query Sequence		E	Y	A	E	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	T	F	L	.	.	.	N	G	E	P	S	C	L	V	L	G	D	N	I	F	.	F	G	Q	G	F	S	P	K	L	R	H	V	A	A	.	.	.	R	T	E	G	A	T	V	F	G	Y	Q	V	M	D	P	E	R	F	G	V	V	E	F
Query Conservation																								.	.	.															.															.	.	.
Alig confidence																								.	.	.															.															.	.	.
Template Conservation
Template Sequence		R	L	L	L	E	P	L	G	R	D	T	A	G	A	V	L	L	G	V	A	E	A	L	K	E	G	A	E	R	L	L	V	L	P	A	D	H	Y	V	G	D	D	E	A	Y	R	E	A	L	A	T	M	L	E	A	A	E	E	G	F	V	V	A	L	G	L	R	P	T	R	P	E	T	E	Y	G	Y	I	R	L
Template Known Secondary structure							S	S																			T		S							S	S				S																		T	T										S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		149	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.								.	.	.	.	.	170	.	.	.	.	.	.	.													.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200
Predicted Secondary structure						.	.	.	.													.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence						.	.	.	.													.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		D	D	N	F	.	.	.	.	R	A	I	S	L	E	E	K	P	K	Q	P	.	.	.	.	.	.	.	K	S	N	W	A	V	T	G	L	Y	F	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	S	K	V	V	E	Y	A	K	Q	V	K	P	S	E	R	G	E	.	.	.	.	.	L	E	I	T	S	I
Query Conservation						.	.	.	.													.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Alig confidence						.	.	.	.													.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation
Template Sequence		G	P	R	E	G	A	W	Y	R	G	E	G	F	V	E	K	P	S	Y	A	E	A	L	E	Y	I	R	K	G	Y	V	W	N	G	G	V	F	A	F	A	P	A	T	M	A	E	L	F	R	R	H	L	P	S	H	H	E	A	L	E	R	L	L	A	G	A	S	L	E	E	V	Y	A	G	L	P	K	I	S	I
Template Known Secondary structure						T	T																						T	T																																			T	T									T	S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	M	Y	L	E	A	G	N	L	T	V	E	L	L	G	R	G	F	A	W	L	D	T	G	T	H	D	S	L	I	E	A	S
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		D	Y	G	V	M	E	K	A	E	R	.	V	R	V	V	L	G	R	F	P	W	D	D	V	G	N	W	R	A	L	E	R	V	F
Template Known Secondary structure					T	G	G	G		S	S	.								S							S	T	T
Template Predicted Secondary structure												.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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