Job Description P0AFD6 Confidence 17.92% Date Thu Jan 5 11:25:59 GMT 2012 Rank 70 Aligned Residues 63 % Identity 24% Template c3o5aB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:diheme cytochrome c napb; PDBTitle: crystal structure of partially reduced periplasmic nitrate reductase2 from cupriavidus necator using ionic liquids Resolution 1.72 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	Y	P	E	E	P	V	Y	L	P	P	R	Y	R	G	R	I	V	L	T	R	D	P	D	G	E	E	R	C	V	A	C	N	L	C	A	V	A	C	P	V	G	C	I	S	L	Q	K	A	E	T	K	D	G	R	W	Y	P	E	F	F	R	I	N	F	S	R	C	I	F	C	G	L	C
Query Conservation
Alig confidence																			.								.	.	.							.	.	.	.	.	.															.															.
Template Conservation																			.								.	.	.							.	.	.	.	.	.															.															.
Template Sequence		T	E	N	K	M	Q	P	P	T	I	P	H	K	I	D	G	Y	.	Q	L	D	K	D	F	N	.	.	.	R	C	M	F	C	H	.	.	.	.	.	.	A	R	T	A	I	P	V	S	I	T	H	Y	M	D	.	R	D	N	N	V	L	A	D	V	S	P	R	R	Y	.	F	C	T	Q	C
Template Known Secondary structure		B									B		S			T	T		.				T	T			.	.	.							.	.	.	.	.	.	S								G	G	G	G	B		.	T	T			B		S	S			G	G	G	S	.		G	G	G	T
Template Predicted Secondary structure																			.								.	.	.							.	.	.	.	.	.															.															.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.				.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions