Job Description P0AFD6 Confidence 99.97% Date Thu Jan 5 11:25:59 GMT 2012 Rank 2 Aligned Residues 140 % Identity 46% Template c2fugG_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:nadh-quinone oxidoreductase chain 9; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus Resolution 3.30 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		Y	P	E	E	P	V	Y	L	P	P	R	Y	R	G	R	I	V	L	T	R	D	P	D	G	E	E	R	C	V	A	C	N	L	C	A	V	A	C	P	V	G	C	I	S	L	Q	K	A	E	T	.	.	.	.	.	.	K	D	G	R	W	Y	P	E	F	F	R	I	N	F	S	R	C	I	F	C	G	L	C	E
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.
Template Conservation
Template Sequence		Y	P	D	A	P	V	A	L	K	P	R	F	H	G	R	H	V	L	T	R	H	P	N	G	L	E	K	C	I	G	C	S	L	C	A	A	A	C	P	A	Y	A	I	Y	V	E	P	A	E	N	D	P	E	N	P	V	S	A	G	E	R	Y	A	K	V	Y	E	I	N	M	L	R	C	I	F	C	G	L	C	E
Template Known Secondary structure				S	S						T	T				S					B		T	T	S		B	S					T							S	S												S	S	S		S	B	S	S	S										T	T	T					T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	C	P	T	T	A	I	Q	L	T	P	D	F	E	M	G	E	Y	K	R	Q	D	L	V	Y	E	K	E	D	L	L	I	S	G	P	G	K	Y	P	E	Y	N	F	Y	R	M	A	G	M	A	I	D	G	K	D	K	G	E	A	E	N	E	A	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	C	P	T	G	A	I	V	L	G	Y	D	F	E	M	A	D	Y	E	Y	S	D	L	V	Y	G	K	E	D	M	L	V	D	V	V	G	T	K	P	Q	R	R	E	A	K	R	T	G	K	P	V	K	V	G	Y	V	V	P	Y	V	R	P	E	L	E
Template Known Secondary structure					S	S	S						S							S	S	G	G	G					S	T	T	T	B	T	T			S													S					S				S	S			S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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