Job Description P0AFD6 Confidence 97.95% Date Thu Jan 5 11:25:59 GMT 2012 Rank 54 Aligned Residues 79 % Identity 22% Template c1nekB_ PDB info PDB header:oxidoreductase/electron transport Chain: B: PDB Molecule:succinate dehydrogenase iron-sulfur protein; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with2 ubiquinone bound Resolution 2.60 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	E	P	V	Y	L	P	P	R	Y	R	G	R	I	V	L	T	R	D	P	D	G	E	E	R	C	V	A	C	N	L	C	A	V	A	C	P	V	G	C	I	S	L	Q	K	A	E	T	K	D	G	R	W	Y	P	E	F	F	R	I	N	F	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	N	G	Q	N	P	P	A	R	E	H	L	Q	M	P	E	Q	R	E	K	L	D	G	L	Y	E	C	I	L	C	A	C	C	S	T	S	C	P	S	F	W	W	N	P	D	K	F	I	G	P	A	G	L	L	A	A	Y	R	F	L	I	D	S	R	D	T	E	T	D	S	R	L	D	G	L	S	D	A	F	S
Template Known Secondary structure						S			S	S	S										T	T	T	T	T	S											T								T	T	T	S														T		T	T										T	T		S	S	S	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
					99	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	C	I	F	C	G	L	C	E	E	A	C	P	T	T
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		V	F	R	C	H	S	I	M	N	C	V	S	V	C	P	K	G
Template Known Secondary structure		T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions