Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFD6
Confidence99.28%DateThu Jan 5 11:25:59 GMT 2012
Rank22Aligned Residues80
% Identity24%Templatec1hfeL_
PDB info PDB header:hydrogenaseChain: L: PDB Molecule:protein (fe-only hydrogenase (e.c.1.18.99.1) PDBTitle: 1.6 a resolution structure of the fe-only hydrogenase from2 desulfovibrio desulfuricans
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
Predicted Secondary structure 























































Query SS confidence 















































































Query Sequence  KRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCE
Query Conservation     
  

          

   
       



 
  
   

  

                  

   

 

 
 
Alig confidence 

























.....























........
















Template Conservation    
                  
 

 .....  
  
  

  

  

      ........         

 

 

Template Sequence  ERIEYEMHTPDPKADPDKLHFVQIDE. . . . . AKCIGCDTCSQYCPTAAIFGEMGE. . . . . . . . PHSIPHIEACINCGQCL
Template Known Secondary structure  TT





TT

GGG

S
T.....TT





TT


B

TTS........

B


GGG




TTG
Template Predicted Secondary structure 

















.....











........








Template SS confidence 















































































   7..10.........20.........30.. .......40.........50...... ...60.........70...
 
   107..110.........
Predicted Secondary structure 




Query SS confidence 












Query Sequence  EACPTTAIQLTPD
Query Conservation    

  

     
Alig confidence 












Template Conservation    

  

     
Template Sequence  THCPENAIYEAQS
Template Known Secondary structure  GG
TT

S

Template Predicted Secondary structure 










Template SS confidence 












   74.....80......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions