Job Description P0AFD6 Confidence 99.42% Date Thu Jan 5 11:25:59 GMT 2012 Rank 8 Aligned Residues 67 % Identity 25% Template c1gthD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil Resolution 2.25 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.
Predicted Secondary structure																																		.	.	.																																										.
Query SS confidence																																		.	.	.																																										.
Query Sequence		Y	L	P	P	R	Y	R	G	R	I	V	L	T	R	D	P	D	G	E	E	R	C	V	A	C	N	L	C	A	V	A	C	.	.	.	P	V	G	C	I	S	L	Q	K	A	E	T	K	D	G	R	W	Y	P	E	F	F	R	I	N	F	S	R	C	I	F	C	G	L	C	E	E	A	C	P	T	.	T	A	I
Query Conservation																																		.	.	.																																										.
Alig confidence																.	.	.	.	.														.	.	.												.	.	.	.	.	.	.	.	.																						.
Template Conservation																.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Sequence		E	L	S	N	I	E	Q	V	V	A	V	I	D	E	.	.	.	.	.	E	M	C	I	N	C	G	K	C	Y	M	T	C	N	D	S	G	Y	Q	A	I	Q	F	D	P	E	T	.	.	.	.	.	.	.	.	.	H	L	P	T	V	T	D	T	C	T	G	C	T	L	C	L	S	V	C	P	I	I	D	C	I
Template Known Secondary structure		G	S		S	S	S								T	.	.	.	.	.	T	T															S		S						T	T	T	.	.	.	.	.	.	.	.	.							T	T												S	S	T	T	S
Template Predicted Secondary structure																.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template SS confidence
		937	.	.	940	.	.	.	.	.	.	.	.	.	950						.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.										.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.
		115	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	T	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	V	S	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1003	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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