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Job DescriptionP75859
Confidence99.92%DateThu Jan 5 12:15:08 GMT 2012
Rank6Aligned Residues158
% Identity26%Templatec2jtyA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:type-1 fimbrial protein, a chain; PDBTitle: self-complemented variant of fima, the main subunit of type 1 pilus
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.........90.........100.
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Query Sequence  GMAGPEQVSMHIYGNVVDQGCDVATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLA
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Template Sequence  AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDA
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   102.......110.........120.........130...... ...140.........150.........160.........170.........180
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Query Sequence  PTLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLN. QVQPLTPLKAGDNTLKYQLRYKSTKAGATGGNATAVLYFDLVYQ
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Template Sequence  GHTNVLALQSSAAGSATNVGVQILDRTGAALTLDGATFSSETTLNNGTNTIPFQARYFATG. AATPGAANADATFKVQYQ
Template Known Secondary structure  GGTTSB


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   81........90.........100.........110.........120.........130.........140. ........150.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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