Return to main results Retrieve Phyre Job Id

Job DescriptionQ46843
Confidence98.51%DateThu Jan 5 12:35:09 GMT 2012
Rank123Aligned Residues190
% Identity18%Templated1odfa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Phosphoribulokinase/pantothenate kinase
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.. .......50.........60.........70.........80......
Predicted Secondary structure 












...
















Query SS confidence 
































. . .











































Query Sequence  NSTPVRVIAIVGCDGSGKSTLTASLVNELAARM. . . PTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRSKAAHVHEKPS
Query Conservation     
 


 


 







   
   
   
...              
   
                         
Alig confidence 




.


























...






..........


























Template Conservation     
 .



 
 








  
   
         
  

.......... 



                     
Template Sequence  NKCPL. FIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYAS. . . . . . . . . . IDDFYLTHEDQLKLNEQFKNNKLLQGR
Template Known Secondary structure 

S
.

TTSSGGGS
..........GGGGB

TTT
GGGSSS
Template Predicted Secondary structure 



.












..........














Template SS confidence 















































































   28.30.. .......40.........50.........60......... 70.........80.........90......
 
   87..90.........100.........110.........120.........130.. .......140..
Predicted Secondary structure 













........................





Query SS confidence 













































. . . . . . . . . . . . . . . . . . . . . . . .









Query Sequence  TPPGNITALVIYLLSCWRAYKFRKMLCKSQQGFLLITDRYPQVEVP. . . . . . . . . . . . . . . . . . . . . . . . GFRFDGPQLA
Query Conservation            
             
   
  
  

 


  
  
........................          
Alig confidence 










...........























........................









Template Conservation 
 
 
 
  

...........   
  
     
  
 

        

           







 

  
    
Template Sequence  GLPGTHDMKLL. . . . . . . . . . . QEVLNTIFNQDTVVLPKYDKSQFKGEGDRCPTGQKIKLPVDIFILEGWFLGFNPILQG
Template Known Secondary structure 
STTSB
...........T




TTT

SS
SS
SSSTT




S
Template Predicted Secondary structure 






...........































Template SS confidence 















































































   97..100....... ..110.........120.........130.........140.........150.........160.....
 
   143......150.........160....... ..170.........180...... ...190.........200..
Predicted Secondary structure 




....






................
Query SS confidence 
























. . . .


















. . . . . . . . . . . . . . . .















Query Sequence  KTTGGNGWIKMLRQRELKLYQWMAS. . . . YLPVLLIRLGIDEQTAFAR. . . . . . . . . . . . . . . . KPDHQLAALQEKIAVT
Query Conservation                           ....  

  
 

   
    
................                
Alig confidence 
























....


















................















Template Conservation                   
  
           
  
 
       
  

 


  

     
 
 
 
  

  
 
 
Template Sequence  IENNDLLTGDMVDVNAKLFFYSDLLWRNPEIKSLGIVFTTDNINNVYGWRLQQEHELISKVGKGMTDEQVHAFVDRYMPS
Template Known Secondary structure  TTT
SSS
TTTTT
TT

S
TTS
S

TT
Template Predicted Secondary structure 
















Template SS confidence 















































































   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   203..... .210.........220.
Predicted Secondary structure 
...........







Query SS confidence 





. . . . . . . . . . .












Query Sequence  PQLTFN. . . . . . . . . . . GAKILELDGRHPA
Query Conservation        ...........      


    
Alig confidence 





...........












Template Conservation 
            
   




 

  
 
Template Sequence  YKLYLNDFVRSESLGSIATLTLGIDSNRNV
Template Known Secondary structure  T
SSSS
TTS
Template Predicted Secondary structure 












Template SS confidence 





























   252.......260.........270.........280.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions