Return to main results Retrieve Phyre Job Id

Job DescriptionQ46843
Confidence99.71%DateThu Jan 5 12:35:09 GMT 2012
Rank34Aligned Residues165
% Identity18%Templatec3cm0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:adenylate kinase; PDBTitle: crystal structure of adenylate kinase from thermus2 thermophilus hb8
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  VRVIAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRSKAAHVHEKPSTPPGNIT
Query Conservation   


 


 







   
   
   
              
   
                                
Alig confidence 































...........




































Template Conservation 

 
 
 
  





 
  
   
    
  ...........                                     
Template Sequence  GQAVIFLGPPGAGKGTQASRLAQELGFKKLST. . . . . . . . . . . GDILRDHVARGTPLGERVRPIMERGDLVPDDLILELI
Template Known Secondary structure 

TTS
T

...........TT
TT



Template Predicted Secondary structure 










...........








Template SS confidence 















































































   4.....10.........20.........30..... ....40.........50.........60.........70..
 
   94.....100.........110.........120.........130.........140.........150.........160.........170...
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  ALVIYLLSCWRAYKFRKMLCKSQQGFLLITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLL
Query Conservation     
             
   
  
  

 


  
  
                                     

  
Alig confidence 


....................











.......................





















Template Conservation     ....................            .......................                      
Template Sequence  REE. . . . . . . . . . . . . . . . . . . . LAERVIFDGFPR. . . . . . . . . . . . . . . . . . . . . . . TLAQAEALDRLLSETGTRLLGV
Template Known Secondary structure  ....................

SS


.......................STT
Template Predicted Secondary structure  ....................







.......................







Template SS confidence 















































































   73.. ....80....... ..90.........100.........
 
   174.....180....... ..190.........200.........210.........220.........230..
Predicted Secondary structure 


................








Query SS confidence 













. . . . . . . . . . . . . . . .












































Query Sequence  IRLGIDEQTAFARK. . . . . . . . . . . . . . . . PDHQLAALQEKIAVTPQLTFNGAKILELDGRHPADEILQASLRAI
Query Conservation 
 

   
    
 ................                           


    


   
   
Alig confidence 













................












































Template Conservation 
 
         
   
     
                                  

     


   
   
Template Sequence  VLVEVPEEELVRRILRRAELEGRSDDNEETVRRRLEVYREKTEPLVGYYEARGVLKRVDGLGTPDEVYARIRAAL
Template Known Secondary structure 

T
SS

TT


S
Template Predicted Secondary structure 





















Template SS confidence 










































































   110.........120.........130.........140.........150.........160.........170.........180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions