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Job DescriptionQ46843
Confidence99.00%DateThu Jan 5 12:35:09 GMT 2012
Rank103Aligned Residues181
% Identity15%Templatec3ch4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:phosphomevalonate kinase; PDBTitle: the crystal structure of human phosphomavelonate kinase at2 1.8 a resolution
Resolution1.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  NMSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRSKAAHVHEK
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Template Sequence  SMAPLGGAPRLVLLFSGKRKSGKDFVTEALQSRLGADVCAV. . . . . . . . . . . . . . . . . . . . . . LRLSGPLKEQYAQEHGL
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   0.........10.........20.........30.........40 .........50.......
 
   85....90.........100.........110........ .120.........130.........140.........150.........160.
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Query Sequence  PSTPPGNITALVIYLLSCWRAYKFRKMLCKSQQG. . . FLLITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELKL
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Template Sequence  NFQYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGISQPIWLVSDTRRVSDIQWFREAY. . . . . . . . . . . . . . . . . . . . . .
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   58.60.........70.........80.........90.........100.........110.....
 
   162.......170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  YQWMASYLPVLLIRLGIDEQTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELDGRHPADEILQASLRAIHAALS
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Template Sequence  . . . . . . GAVTQTVRVVALEQSRQQRGWVFTPGVDDAESECGLDNFGDFD. . WVIENHGVEQRLEEQLENLIEFIRS
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   123......130.........140.........150.........160..... ....170.........180.........190
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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