Return to main results Retrieve Phyre Job Id

Job DescriptionQ46843
Confidence96.67%DateThu Jan 5 12:35:09 GMT 2012
Rank278Aligned Residues27
% Identity33%Templatec3cf1C_
PDB info PDB header:transport proteinChain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx
Resolution4.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30........
Predicted Secondary structure 








Query SS confidence 


























Query Sequence  TPVRVIAIVGCDGSGKSTLTASLVNEL
Query Conservation   
 


 


 







   
   
Alig confidence 


























Template Conservation      



 







 


 

 

Template Sequence  KPPRGILLYGPPGTGKTLIARAVANET
Template Known Secondary structure 




S
TTS
Template Predicted Secondary structure 









Template SS confidence 


























   236...240.........250.........260..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions