Job Description Q46843 Confidence 99.11% Date Thu Jan 5 12:35:09 GMT 2012 Rank 94 Aligned Residues 181 % Identity 18% Template c3asyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uridine kinase; PDBTitle: ligand-free structure of uridine kinase from thermus thermophilus hb8 Resolution 2.40 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	V	R	V	I	A	I	V	G	C	D	G	S	G	K	S	T	L	T	A	S	L	V	N	E	L	A	A	R	M	P	T	E	H	I	Y	L	G	Q	S	S	G	R	I	G	E	W	I	S	Q	L	P	V	I	G	A	P	F	G	R	Y	L	R	S	K	A	A	H	V	H	E	K	P	S	T	P	P	G	N
Query Conservation
Alig confidence					.																								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	P	F	.	V	I	G	I	A	G	G	T	A	S	G	K	T	T	L	A	Q	A	L	A	R	T	L	.	.	.	G	E	R	V	A	L	L	P	M	D	H	Y	Y	K	D	L	G	H	L	P	L	E	E	R	L	R	V	N	Y	D	H	P	D	A	F	D	L	A	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					.								T	T	S	S													.	.	.	G	G	G						G	G	G		B				T	T	S		T	T	S	S	S	S	S		T	T	S	G	G	G	B				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.																								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	A	L	V	I	Y	L	L	S	C	W	R	A	Y	K	F	R	K	M	L	C	K	S	Q	Q	G	F	L	L	I	T	D	R	Y	P	Q	V	E	V	P	G	F	R	F	D	G	P	Q	L	A	K	T	T	G	G	N	G	W	I	K	M	L	R	Q	R	E	L	K	L	Y	Q	W	M	A	S	Y	L	P	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	L	E	H	A	Q	A	L	L	R	G	L	P	V	E	M	P	V	Y	D	F	R	A	Y	T	R	S	P	R	R	T	P	V	R	P	A	P	V	V	I	L	E	G	I	L	V	L	Y	P	K	E	L	R	.	.	.	.	.	.	.	D	L	M	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T										T	T	T	T													S						S	T	T	T	T	S	S					.	.	.	.	.	.	.	T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Template SS confidence
																	69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Query Sequence		L	L	I	R	L	G	I	D	E	Q	T	A	F	A	R	K	P	D	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	A	A	L	Q	E	K	I	A	V	T	P	Q	L	T	F	N	G	A	K	I	L	E	L	D	G	R	H	P	.	.	.	A	D	E	I	L	Q	A	S	L	R
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation
Template Sequence		L	K	V	F	V	D	A	D	A	D	E	R	F	I	R	R	L	K	R	D	V	L	E	R	G	R	S	L	E	G	V	V	A	Q	Y	L	E	Q	V	K	P	M	H	L	H	F	V	E	P	T	K	R	Y	A	D	V	I	V	P	R	G	G	Q	N	P	V	A	L	E	M	L	A	A	K	A	L	A
Template Known Secondary structure																								T	S														T								T	T	G	G	G	G	G	G		S					S	T	T	S													T
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions