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Job DescriptionQ46843
Confidence98.46%DateThu Jan 5 12:35:09 GMT 2012
Rank125Aligned Residues143
% Identity17%Templatec3a4mB_
PDB info PDB header:transferaseChain: B: PDB Molecule:l-seryl-trna(sec) kinase; PDBTitle: crystal structure of archaeal o-phosphoseryl-trna(sec)2 kinase
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
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Query Sequence  VRVIAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRSKAAHVHEKPSTPPGNIT
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Template Sequence  IMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLG. . . . . . . SDLIRESFPVWKEKYEEFIK. . . . . . . . . . . . . . . . .
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   4.....10.........20.........30......... 40.........50.........
 
   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  ALVIYLLSCWRAYKFRKMLCKSQQGFLLITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLL
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Template Sequence  . . . . . . . . . . . . KSTYRLIDSALKNYWVIVDDTN. . . . . . . . . . . . . . . . . . . . . . . . YYNSMRRDLINIAKKYNKNYAI
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   60.........70.........80. ........90.........100...
 
   174.....180.........190.........200.........210......
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Query Sequence  IRLGIDEQTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELD
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Template Sequence  IYLKASLDVLIRRNIERGEKIPNEVIKKMYEKFDEPGKKYKWD
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   104.....110.........120.........130.........140......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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