Job Description Q46843 Confidence 99.59% Date Thu Jan 5 12:35:09 GMT 2012 Rank 52 Aligned Residues 182 % Identity 16% Template c2vp4D_ PDB info PDB header:transferase Chain: D: PDB Molecule:deoxynucleoside kinase; PDBTitle: structural studies of nucleoside analog and feedback2 inhibitor binding to drosophila melanogaster3 multisubstrate deoxyribonucleoside kinase Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	T	P	V	R	V	I	A	I	V	G	C	D	G	S	G	K	S	T	L	T	A	S	L	V	N	E	L	A	A	R	M	P	T	E	H	I	Y	L	G	Q	S	S	G	R	I	G	E	W	I	S	Q	L	P	V	I	G	A	P	F	G	R	Y	L	R	S	K	A	A	H	V	H	E	K	P	S	T	P	P
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	T	Q	P	F	T	V	L	I	E	G	N	I	G	S	G	K	T	T	Y	L	N	H	F	E	K	Y	K	N	D	I	C	L	L	T	E	P	V	E	K	W	R	N	V	N	G	V	N	L	L	E	L	M	Y	K	D	P	K	K	W	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T											S	T	T	S								T	T	G	G	G	T	T	T							T					T		B	T	T	B															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	I	T	A	L	V	I	Y	L	L	S	C	W	R	A	Y	K	F	R	K	M	L	C	K	S	Q	Q	G	F	L	L	I	T	D	R	Y	P	Q	V	E	V	P	G	F	R	F	D	G	P	Q	L	A	K	T	T	G	G	N	G	W	I	K	M	L	R	Q	R	E	L	K	L	Y	Q	W	M	A	S	Y	L
Query Conservation
Alig confidence		.	.																																																																			.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																																			.	.	.	.	.	.	.	.	.
Template Sequence		.	.	M	P	F	Q	S	Y	V	T	L	T	M	L	Q	S	H	T	A	P	T	N	K	K	L	K	I	M	E	R	S	I	F	S	A	R	Y	C	F	V	E	N	M	R	R	N	G	S	L	E	Q	G	M	Y	N	T	L	E	E	W	Y	K	F	I	E	E	S	I	.	.	.	.	.	.	.	.	.	H	V	Q
Template Known Secondary structure		.	.																				S	S	S						S								T								T	T	S	S																			B	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
				78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.										.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.												.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		P	V	L	L	I	R	L	G	I	D	E	Q	T	A	F	A	R	K	.	.	.	.	.	.	.	.	.	.	.	P	D	H	Q	L	A	A	L	Q	E	K	I	A	V	T	P	Q	L	T	F	N	G	A	K	.	.	I	L	E	L	D	G	R	H	P
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation
Template Sequence		A	D	L	I	I	Y	L	R	T	S	P	E	V	A	Y	E	R	I	R	Q	R	A	R	S	E	E	S	C	V	P	L	K	Y	L	Q	E	L	H	E	L	H	E	D	W	L	I	H	Q	R	R	P	Q	S	C	K	V	L	V	L	D	A	D	L	N
Template Known Secondary structure			S																						G	G	G	T	T																		T	S			S	S											S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions