Job Description Q46843 Confidence 99.40% Date Thu Jan 5 12:35:09 GMT 2012 Rank 69 Aligned Residues 150 % Identity 17% Template c1qhiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (thymidine kinase); PDBTitle: herpes simplex virus type-i thymidine kinase complexed with2 a novel non-substrate inhibitor, 9-(4-hydroxybutyl)-n2-3 phenylguanine Resolution 1.90 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	V	G	C	D	G	S	G	K	S	T	L	T	A	S	L	V	N	E	L	A	A	R	M	P	T	E	H	I	Y	L	G	Q	S	S	G	R	I	G	E	W	I	S	Q	L	P	V	I	G	A	P	F	G	R	Y	L	R	S	K	A	A	H	V	H	E	K	P	S	T	P	P	G	N	I	T	A	L	V
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Sequence		V	Y	I	D	G	P	H	G	M	G	K	T	T	T	T	Q	L	L	.	.	.	.	.	.	.	.	.	D	I	V	Y	V	P	E	P	.	.	.	.	.	M	T	Y	W	R	V	L	G	A	S	E	T	I	A	N	I	Y	T	T	Q	H	R	L	D	Q	G	E	I	S	A	G	D	A	A	V	V	M	T	S	A
Template Known Secondary structure						S	S	T	T	S	S						T	T		.	.	.	.	.	.	.	.	.									.	.	.	.	.						T	T	S	S	S															T	T	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.										70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.															.	.	.
Query SS confidence																					.	.	.	.															.	.	.
Query Sequence		I	Y	L	L	S	C	W	R	A	Y	K	F	R	K	M	L	C	K	S	.	.	.	.	Q	Q	G	F	L	L	I	T	D	R	Y	P	Q	V	.	.	.	E	V	P	G	F	R	F	D	G	P	Q	L	A	K	T	T	G	G	N	G	W	I	K	M	L	R	Q	R	E	L	K	L	Y	Q	W	M	A	S	Y	L
Query Conservation																					.	.	.	.															.	.	.
Alig confidence																					.	.	.	.															.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	I	T	M	G	M	P	Y	A	V	T	D	A	V	L	A	P	H	I	G	G	E	A	P	P	A	L	T	L	I	F	D	R	H	P	I	A	A	L	L	C	Y	P	A	A	R	Y	L	M	G	S	M	T	.	.	.	.	.	.	.	.	.	.	.	P	Q	A	V	L	A	F	V	A	L	I	P	P	T	L	P
Template Known Secondary structure																	G	G	G								S														T								T	T	T	S	S		.	.	.	.	.	.	.	.	.	.	.										T						T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.												.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	L	L	I	R	L	G	I	D	E	Q	T	A	F	A	R	K	P	D	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	N	I	V	L	G	A	L	P	E	D	R	H	I	D	R	L	A	K	R	Q
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions