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Job DescriptionP37655
Confidence99.97%DateThu Jan 5 11:56:28 GMT 2012
Rank19Aligned Residues202
% Identity15%Templatec3k9gA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:pf-32 protein; PDBTitle: crystal structure of a plasmid partition protein from borrelia2 burgdorferi at 2.25a resolution, iodide soak
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40........ .50.........60.........70.....
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Query Sequence  AVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSF. . . . . . NVDFTHRQGWARAMLDGQDWRDAGLRY
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Template Sequence  KIITIASIKGGVGKSTSAIILATLLSK. NNKVLLIDMDTQASITSYFYEKIEKLGINFTKFNIYEILKENVDIDSTIINV
Template Known Secondary structure 

SSSSS
TT.TS

TT
TTT

TTTSSTTSS
GGGG
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   7..10.........20.........30... ......40.........50.........60.........70.........80.....
 
   76...80.........90.........100.........110.........120.........130.........140.........150.....
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Query Sequence  TSQLDLLPFGQLSIEEQENPQHWQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHI
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Template Sequence  DNNLDLIPSYLTLHNFSEDKIEHKDFLLKTSLG. . . . TLYYKYDYIVIDTNPSLDVTLKNALLCSDYVIIPMTAEKWAVE
Template Known Secondary structure  TT


GGGGGTTT


TTGGG....TT
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STT
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TT
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   86...90.........100.........110........ .120.........130.........140.........150.........160.
 
   156... 160.........170.........180.........190.........200.........210.
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Query Sequence  RLHQ. . . . . . . QALPDGAHILINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAMAECLAA
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Template Sequence  SLDLFNFFVRKLNLFLPIFLIITRFKKNRTHKTLFEI. . . LKTKDRFLGTISENKDYIKEYEN
Template Known Secondary structure  TTT




TT
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   162.......170.........180.........190........ .200.........210.........220.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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