Job Description P37655 Confidence 100.00% Date Thu Jan 5 11:56:28 GMT 2012 Rank 10 Aligned Residues 242 % Identity 14% Template c3ez6B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:plasmid partition protein a; PDBTitle: structure of para-adp complex:tetragonal form Resolution 2.58 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.																															.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.																															.	.	.	.	.	.	.
Query Sequence		A	V	L	G	L	Q	G	V	R	G	G	V	G	T	T	T	I	T	A	A	L	A	W	S	L	Q	.	.	.	.	.	.	M	L	G	E	N	V	L	V	V	D	A	C	P	D	N	L	L	R	L	S	F	N	V	D	F	T	H	R	Q	G	.	.	.	.	.	.	.	W	A	R	A	M	L	D	G	Q	D	W
Query Conservation																												.	.	.	.	.	.																															.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	V	I	F	I	S	N	L	K	G	G	V	S	K	T	V	S	T	V	S	L	A	H	A	M	R	A	H	P	H	L	L	M	E	D	L	R	I	L	V	I	D	L	D	P	Q	S	S	A	T	M	F	L	S	H	K	H	S	I	G	I	V	N	A	T	S	A	Q	A	M	L	Q	N	V	S	R	E	E	L	L
Template Known Secondary structure									S	S	S	S	S	S																T	T	T	G	G	G											T	T								S		T	T	T	T		S		S	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure										.																													.	.	.	.	.	.
Query SS confidence										.																													.	.	.	.	.	.
Query Sequence		R	D	A	G	L	R	Y	T	.	S	Q	L	D	L	L	P	F	G	Q	L	S	I	E	E	Q	E	N	P	Q	H	W	Q	T	R	L	S	D	.	.	.	.	.	.	I	C	S	G	L	Q	Q	L	K	A	S	G	R	Y	Q	W	I	L	I	D	L	P	R	D	A	S	Q	I	T	H	Q	L	L	S	L	C	D
Query Conservation										.																													.	.	.	.	.	.
Alig confidence										.																													.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	F	I	V	P	S	V	V	P	G	V	D	V	M	P	A	S	I	D	D	A	F	I	A	S	D	W	R	E	L	C	N	E	H	L	P	G	Q	N	I	H	A	V	L	K	E	N	V	I	D	K	L	K	S	D	Y	D	F	I	L	V	D	S	G	P	H	L	D	A	F	L	K	N	A	L	A	S	A	N
Template Known Secondary structure				T					S	S	T	T								T	T							T									S	T	T	S		T	T	S						T					T	T	T		S								S			S											S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query Sequence		H	S	L	A	I	V	N	V	D	A	N	C	H	I	R	L	H	Q	Q	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	G	A	H	I	L	I	N	D	F	R	I	G	S	Q	V	Q	D	D	I	Y	Q	L	W	L	Q	S	Q	.	.	R	R	L	L	P	M	L	I	H	R	D	E	A
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation
Template Sequence		I	L	F	T	P	L	P	P	A	T	V	D	F	H	S	S	L	K	Y	V	A	R	L	P	E	L	V	K	L	I	S	D	E	G	C	E	C	Q	L	A	T	N	I	G	F	M	S	K	L	S	N	K	A	D	H	K	Y	C	H	S	L	A	K	E	V	F	G	G	D	M	L	D	V	F	L	P	R	L	D	G
Template Known Secondary structure									S	S												T	T											T	S																	S																G	G	G	B		S	S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.										.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.
Query Sequence		M	A	E	C	L	A	A	K	Q	P	V	G	E	Y	R	S	D	A	.	.	.	.	.	.	.	.	.	L	A	A	E	E	I	L	T	L	A	N	W	C	L	L	N	Y	S	G	L	K
Query Conservation																				.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	R	C	G	E	S	F	D	T	V	I	S	A	N	P	A	T	Y	V	G	S	A	D	A	L	K	N	A	R	I	A	A	E	D	F	A	K	A	V	F	D	R	I	E	F	I	R
Template Known Secondary structure								T	T			T	T	T	S		T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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