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Job DescriptionP37655
Confidence100.00%DateThu Jan 5 11:56:28 GMT 2012
Rank13Aligned Residues223
% Identity18%Templatec3ea0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:atpase, para family; PDBTitle: crystal structure of para family atpase from chlorobium tepidum tls
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20......... 30.........40.........50.........60.........70. ...
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Query Sequence  MAVLGLQGVRGGVGTTTITAALAWSLQML. GENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDA. . . . . GLR
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Template Sequence  KRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLPFGDLDXYLSGNTHSQDLADISNASDRLDKSLLDTXVQH
Template Known Secondary structure  SSSTTSSTTSTT



TTT

GGGGT
SS

S

GGGG

S
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   75....80.........90.........100.........110.........120.........130.........140.........150....
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Query Sequence  YTSQLDLLPFGQLSIEEQENPQHWQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCH
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Template Sequence  ISPSLDLIPSPATFEKIVNIE. . . . . . . . PERVSDLIHIAASFYDYIIVDFGASIDHVGVWVLEHLDELCIVTTPSLQSL
Template Known Secondary structure  TT


SST

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TTGGG
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   81........90.........100. ........110.........120.........130.........140.........150..
 
   155.... 160.........170.........180.........190.........200..... ....210.........220.....
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Query Sequence  IRLHQ. . . . . . . . QALPDGAHILINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAM. AECLAAKQPVGEYRSDALAA
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Template Sequence  RRAGQLLKLCKEFEKPISRIEIILNRADTSRIT. . . . SDEIEKVIGRPISKRIPQDEDAXQESLLSGQSVLKVAPKSQLS
Template Known Secondary structure  TT
SS

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   153......160.........170.........180..... ....190.........200.........210.........220........
 
   226...230.....
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Query Sequence  EEILTLANWC
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Template Sequence  KTIVDWALHL
Template Known Secondary structure  T

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   230.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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