Return to main results Retrieve Phyre Job Id

Job DescriptionP37655
Confidence100.00%DateThu Jan 5 11:56:28 GMT 2012
Rank14Aligned Residues223
% Identity18%Templatec2xj9B_
PDB info PDB header:replicationChain: B: PDB Molecule:mipz; PDBTitle: dimer structure of the bacterial cell division regulator mipz
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  AVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDL
Query Conservation 




 
 









 


  

  
  




 
        
                              
  
Alig confidence 















































..........





















Template Conservation 


 
   







 
  

  

  
  




 
          ..........                     
Template Sequence  RVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLALRQRTSARFF. . . . . . . . . . ENRRAWLDNKKIELPEPLALNL
Template Known Secondary structure 

SSTTSSTTT



TTT
..........T






S
Template Predicted Secondary structure 
















..........














Template SS confidence 















































































   5....10.........20.........30.........40.........50.. .......60.........70....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  LPFGQLSIEEQENPQHWQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQA
Query Conservation 
                                    
 



            
  

 

 
               
Alig confidence 

.......






































































Template Conservation    .......                
   
       
 



 
         

  

 



   
  

       
Template Sequence  SD. . . . . . . NDVALAERPEEEQVAGFEAAFARAMAECDFILIDTPGGDSAITRMAHGRADLVVTPMNDSFVDFDMLGTVD
Template Known Secondary structure  SS.......
TTS

S

SS

T
SSS
Template Predicted Secondary structure  .......























Template SS confidence 















































































   75. ...80.........90.........100.........110.........120.........130.........140.......
 
   162.. .....170.........180. ........190.........200.........210
Predicted Secondary structure 


...........................







....







Query SS confidence 


. . . . . . . . . . . . . . . . . . . . . . . . . . .
















. . . .




























Query Sequence  LPD. . . . . . . . . . . . . . . . . . . . . . . . . . . GAHILINDFRIGSQVQD. . . . DIYQLWLQSQRRLLPMLIHRDEAMAECLA
Query Conservation     ...........................                 ....                 

 
     
  
Alig confidence 


...........................
















....




























Template Conservation                 
                 

 

               
          
   
  
     
  
Template Sequence  PVTLELTKPSLYSLTVWEGRKQRALSGQAMDWVVLRNRLATTEARNRKRLEDRLNALAKRVGFRIGPGLRDRVIYRELFP
Template Known Secondary structure  SSS


TTSSS



SB
S

T



B

GGGTTTGG
Template Predicted Secondary structure 























Template SS confidence 















































































   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   211........220.. .......230..... ....240.
Predicted Secondary structure 







.........
Query SS confidence 











. . . . . . . .












.





Query Sequence  AKQPVGEYRSDA. . . . . . . . LAAEEILTLANWC. LLNYSG
Query Conservation   
 

    
 
........  
     

  
.     
Alig confidence 











........












.





Template Conservation   
 

 

             
  
   
   
       
Template Sequence  FGLTIADLSPQPVPVSLQHLAARQELRALMHSLGLSAYSG
Template Known Secondary structure  GT

GGGS







TT
GGG

Template Predicted Secondary structure 
















Template SS confidence 







































   230.........240.........250.........260.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions