Job Description P37655 Confidence 99.94% Date Thu Jan 5 11:56:28 GMT 2012 Rank 23 Aligned Residues 223 % Identity 17% Template c2wojD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atpase get3; PDBTitle: adp-alf4 complex of s. cerevisiae get3 Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.									.	.	70	.
Predicted Secondary structure																												.	.																																									.	.	.	.	.	.	.	.
Query SS confidence																												.	.																																									.	.	.	.	.	.	.	.
Query Sequence		A	V	L	G	L	Q	G	V	R	G	G	V	G	T	T	T	I	T	A	A	L	A	W	S	L	Q	.	.	M	L	G	E	N	V	L	V	V	D	A	C	P	D	N	L	L	R	L	S	F	N	V	D	F	T	H	R	Q	G	W	A	R	A	M	L	D	G	Q	D	.	.	.	.	.	.	.	.	W	R	D	A
Query Conservation																												.	.																																									.	.	.	.	.	.	.	.
Alig confidence																												.	.																																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	K	W	I	F	V	G	G	K	G	G	V	G	K	T	T	S	S	C	S	I	A	I	Q	M	A	L	S	Q	P	N	K	Q	F	L	L	I	S	T	D	P	A	H	N	L	S	D	A	F	G	E	K	F	G	K	D	A	R	K	V	T	G	M	N	N	L	S	C	M	E	I	D	P	S	A	A	L	K	D	M
Template Known Secondary structure										S	T	T	S	S																	T	T	S									S	S								T	S				S	S					T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	R	Y	T	S	Q	L	D	L	L	P	F	G	Q	L	S	I	E	E	Q	E	N	P	Q	H	W	Q	T	R	L	S	D	I	C	S	G	L	Q	Q	L	K	A	S	G	R	Y	Q	W	I	L	I	D	L	P	R	D	A	S	Q	I	T	H	Q	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		N	D	M	A	V	S	R	G	S	L	L	Q	G	G	A	L	.	.	.	.	.	A	D	L	T	G	S	I	P	G	I	D	E	A	L	S	F	M	E	V	M	K	H	I	K	R	F	D	T	V	I	F	D	T	A	P	T	G	H	T	L	R	F	L	Q	L	P	N	T	L	S	K	L	L	E	K	F	G	I	S
Template Known Secondary structure														T	S			.	.	.	.	.					T	T	S	T	T																																														T	T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
																					138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180												.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	C	D	H	S	L	A	I	V	N	V	D	A	N	C	H	I	R	L	H	.	.	.	.	.	.	Q	Q	A	L	P	D	G	A	H	I	L	I	N	D	F	R	I	G	S	Q	V	Q	.	.	.	.	.	.	.	.	.	.	.	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	L	N	E	L	K	A	N	V	E	T	I	R	Q	Q	F	T	D	P	D	L	T	T	F	V	C	V	C	I	S	E	F	L	S	L	Y	E	T	E	R	L	I	Q	E	L	I	S	Y	D	M	D	V	N	S	I	I	V	N	Q	L	L	F	A	E	N	D	Q	C	K	R	C	Q	A	R	W	K	M	Q	K
Template Known Secondary structure																			T		T	T	T									S	S																	T	T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	Y	Q	L	W	L	Q	S	Q	R	R	L	L	P	M	L	I	H	R	D	E	A	M	A	E	C	L	A	A	K	Q	P	V	G	E	Y	R	S	D	A	L	A	A	E	E	I	L	T	L	A	N	W	C	L	L	N	Y	S	G	L	K	T	P
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	L	D	Q	I	D	E	L	Y	E	D	F	H	V	V	K	M	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	A	G	E	I	R	G	L	N	N	L	T	K	F	S	Q	F	L	N	K	E	Y	N	P	I	T	D	G
Template Known Secondary structure											T	T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S				S													S								G
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.																	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions