Job Description P37655 Confidence 100.00% Date Thu Jan 5 11:56:28 GMT 2012 Rank 4 Aligned Residues 243 % Identity 14% Template c2ozeA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:orf delta'; PDBTitle: the crystal structure of delta protein of psm19035 from2 streptoccocus pyogenes Resolution 1.83 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		M	A	V	L	G	L	Q	G	V	R	G	G	V	G	T	T	T	I	T	A	A	L	A	W	S	L	Q	M	L	G	E	N	V	L	V	V	D	A	C	P	D	N	L	L	R	L	S	F	N	V	D	F	T	H	R	Q	G	W	A	R	A	M	L	.	.	D	G	Q	D	W	R	D	A	G	L	R	Y	T	S	Q
Query Conservation																																																																	.	.
Alig confidence																																																																	.	.
Template Conservation
Template Sequence		A	I	V	I	L	N	N	Y	F	K	G	G	V	G	K	S	K	L	S	T	M	F	A	Y	L	T	D	K	L	N	L	K	V	L	M	I	D	K	D	L	Q	A	T	L	T	K	D	L	A	K	T	F	K	V	E	L	P	R	V	N	F	Y	E	G	L	K	N	G	N	L	A	S	S	I	V	H	L	T	D	N
Template Known Secondary structure										S	S	S	S	S	S															T	T										T	T								T	T	T	S						S	S									T			G	G	G				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	L	L	P	F	G	Q	L	S	I	E	E	Q	E	N	P	Q	H	W	Q	T	R	L	S	D	I	C	S	G	L	Q	Q	L	K	A	S	G	R	Y	Q	W	I	L	I	D	L	P	R	D	A	S	Q	I	T	H	Q	L	L	S	L	C	D	H	S	L	A	I	V	N	V	D	A	N	C	H	I	R	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	L	I	P	G	T	F	D	L	M	L	L	P	K	L	T	R	S	W	T	F	E	N	E	S	R	L	L	A	T	L	L	A	P	L	K	S	D	Y	D	L	I	I	I	D	T	V	P	T	P	S	V	Y	T	N	N	A	I	V	A	S	D	Y	V	M	I	P	L	Q	A	E	E	E	S	T	N	N	I	Q
Template Known Secondary structure									G	G	G	G	G					T	T	T	S							T							G	G	G	G	G	G		S								S	S		S											S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		159													160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query Sequence		Q	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	L	P	D	G	A	H	I	L	I	N	D	F	R	I	G	S	Q	V	Q	D	D	I	Y	Q	L	W	L	Q	S	Q	R	.	.	.	R	L	L	P	M	L	I	H	R	D	E	A	M	A	E	C	L	A	A	K	Q	P	V	G	E	Y	R	S	D	A	L
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.																										.
Template Conservation																																																																												.
Template Sequence		N	Y	I	S	Y	L	I	D	L	Q	E	Q	F	N	P	G	L	D	M	I	G	F	V	P	Y	L	V	D	T	D	S	A	T	I	K	S	N	L	E	E	L	Y	K	Q	H	K	E	D	N	L	V	F	Q	N	I	I	K	R	S	N	K	V	S	T	W	S	K	N	G	I	T	E	H	K	.	G	Y	D	K	K
Template Known Secondary structure																T	T											S		T	T															T	T	T	T			B		S	S																		S	S	S	.	T	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	E	I	L	T	L	A	N	W	C	L	L	N	Y	S	G	L	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	S	M	Y	K	N	V	F	F	E	M	L	E	R	I	I	Q	L	E	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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