Return to main results Retrieve Phyre Job Id

Job DescriptionP37655
Confidence86.54%DateThu Jan 5 11:56:28 GMT 2012
Rank434Aligned Residues33
% Identity30%Templatec2gk7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: structural and functional insights into the human upf1 helicase core
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20........ .30......
Predicted Secondary structure 






.



Query SS confidence 
























.







Query Sequence  LGLQGVRGGVGTTTITAALAWSLQM. LGENVLVV
Query Conservation 


 
 









 


  

 . 
  



Alig confidence 
























.







Template Conservation    

 







 

   
          


 
Template Sequence  LSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVC
Template Known Secondary structure 

TTS
T
SS
Template Predicted Secondary structure 











Template SS confidence 

































   487..490.........500.........510.........520
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions