Job Description P0AEW6 Confidence 100.00% Date Thu Jan 5 11:24:28 GMT 2012 Rank 36 Aligned Residues 274 % Identity 19% Template c3i3yB_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase; PDBTitle: crystal structure of ribokinase in complex with d-ribose from2 klebsiella pneumoniae Resolution 2.15 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	V	G	I	D	Q	T	L	V	D	I	E	A	K	V	D	D	E	F	I	E	R	Y	G	L	S	A	G	H	S	L	V	I	E	D	D	V	A	E	A	L	Y	Q	E	L	K	Q	K	N	L	I	T	H	Q	F	A	G	G	T	I	G	N	T	M	H	N	Y	S	V	L	A	D	D	R	S	V	L	L	G
Query Conservation
Alig confidence																			.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	Y	V	T	G	N	I	T	V	D	E	T	W	S	I	P	.	.	.	.	.	.	.	D	I	P	K	K	G	A	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	V	K	V	S	Q	D	I	G	G	K	G	A	N	Q	A	I	I	L	S	R	C	G	I	E	T	R	L	I	A	A
Template Known Secondary structure																		S	.	.	.	.	.	.	.	S				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.								.	20	.	.	.	.	.	.	.																.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		V	M	C	S	N	I	E	I	G	S	Y	A	Y	R	Y	L	C	N	T	S	S	R	T	D	L	N	Y	L	Q	G	V	D	G	P	I	G	R	C	F	T	L	I	G	E	S	G	E	R	T	F	A	I	S	P	G	H	M	N	Q	L	R	A	E	S	I	P	E	D	V	.	I	A	G	A	S	A	L	V	L	T
Query Conservation																																																																							.
Alig confidence		.	.																				.	.																					.	.																									.
Template Conservation		.	.																				.	.																					.	.
Template Sequence		.	.	T	G	N	D	S	N	G	A	W	I	R	Q	Q	I	K	N	E	P	L	.	.	X	L	L	P	D	G	H	F	N	Q	H	S	D	T	S	I	I	L	A	D	.	.	G	N	A	I	I	T	T	T	A	A	A	D	T	F	S	L	D	E	X	I	P	H	X	A	D	A	V	A	G	D	I	L	L	Q	Q
Template Known Secondary structure		.	.			S	S											T	T	S	S		.	.				S	S	S			S	S											.	.									T	T	T	T	T							G	G	G	G	T	T			T	T
Template Predicted Secondary structure		.	.																				.	.																					.	.
Template SS confidence
				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	L	V	R	C	K	P	G	E	P	M	P	E	A	T	M	K	A	I	E	Y	A	K	K	Y	N	V	P	V	V	L	T	L	G	T	K	F	V	I	A	E	N	P	Q	W	W	Q	Q	F	L	K	D	H	V	S	I	L	A	M	N	E	D	E	A	E	A	L	T	G	E	S	D	P	L	L	A	S	D	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	G	N	F	S	L	D	K	T	R	A	L	F	Q	Y	A	R	S	R	G	X	T	T	V	F	N	P	S	P	.	.	.	.	.	.	.	V	N	P	D	F	C	H	L	W	P	L	I	D	I	A	V	V	N	E	S	E	A	E	L	L	Q	P	Y	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	S		S															T	T									S	.	.	.	.	.	.	.			G	G	G	G	G		G	G	G		S																.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
										137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.								.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	D	W	V	D	L	V	L	C	T	A	G	P	I	G	L	Y	M	A	G	F	T	E	D	E	A	K	R	K	T	Q	H	P	L	L	P	G	A	I	A	E	F	N	Q	Y	E	F	S	R	A	M	R	H	K	D	C	Q	N	P	L	R	V	Y	S	H	I	A	P	Y	M	G	G	P	E	K	I	M	N	T
Query Conservation
Alig confidence		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	G	V	K	T	L	V	I	T	Q	G	A	A	G	A	W	L	V	Q	E	G	Q	R	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	P	A	V	P	A	E	A	L	D	T
Template Known Secondary structure		.	.	.	S		S							T	T	S						S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S
Template Predicted Secondary structure		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																																											.	.	.	220	.	.	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	A	G	D	G	A	L	A	A	L	L	H	D	I	T	A	N	S	Y	H	R	S	N	V	P	N	S	S	K	H	K	F	T	W	L	T	Y	S	S	L	A	Q	V	C	K	Y	A	N	R	V	S	Y	Q	V	L	N	Q	H	S	P	R	L	T	R	G	L	P	E	R	E	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Sequence		T	G	A	G	D	T	F	L	A	V	X	L	A	S	A	L	L	R	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	D	A	L	A	L	A	H	A	S	R	A	A	A	I	T	V	S	R	R	G	T	L	.	.	S	A	F	P	G	S	R	E
Template Known Secondary structure		T	T																T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S																T	T	S		S	S	G	.	.	G	G	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.																			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions