Job Description P0AEW6 Confidence 100.00% Date Thu Jan 5 11:24:28 GMT 2012 Rank 19 Aligned Residues 279 % Identity 20% Template c3go6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribokinase rbsk; PDBTitle: crystal structure of m. tuberculosis ribokinase (rv2436) in2 complex with ribose and amp-pnp Resolution 1.98 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	W	V	V	G	I	D	Q	T	L	V	D	I	E	A	K	V	D	D	E	F	I	E	R	Y	G	L	S	A	G	H	S	L	V	I	E	D	D	V	A	E	A	L	Y	Q	E	L	K	Q	K	N	L	I	T	H	Q	F	A	G	G	T	I	G	N	T	M	H	N	Y	S	V	L	A	D	D	R	S	V	L
Query Conservation
Alig confidence																					.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation																					.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Sequence		A	P	R	V	C	V	V	G	S	V	N	M	D	L	T	F	V	V	D	.	.	.	.	.	.	.	A	L	P	R	P	G	E	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	S	L	T	R	T	P	G	G	K	G	A	N	Q	A	V	A	A	A	R	A	G	A	Q	.	.	V	Q
Template Known Secondary structure																				S	.	.	.	.	.	.	.	S				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S																				T	T			.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40																.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	M	C	S	N	I	E	I	G	S	Y	A	Y	R	Y	L	C	N	T	S	S	R	T	D	L	N	Y	L	Q	G	V	D	G	P	I	G	R	C	F	T	L	I	G	E	S	G	E	R	T	F	A	I	S	P	G	H	M	N	Q	L	R	A	E	S	I	P	E	D	V	I	A	G	A	S	A	L	V	L
Query Conservation
Alig confidence																									.	.																																										.	.	.
Template Conservation																									.	.																																										.	.	.
Template Sequence		F	S	G	A	F	G	D	D	P	A	A	A	Q	L	R	A	H	L	R	A	N	A	V	.	.	G	L	D	R	T	V	T	V	P	G	P	S	G	T	A	I	I	V	V	D	A	S	A	E	N	T	V	L	V	A	P	G	A	N	A	H	L	T	P	V	P	.	.	.	S	A	V	A	N	C	D	V	L	L	T
Template Known Secondary structure								S	S													T	T		.	.	B		T	T					S	S											T	T										G	G	G	G	G					G	.	.	.	G	G	G	T	T		S
Template Predicted Secondary structure																									.	.																																										.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	Y	L	V	R	C	K	P	G	E	P	M	P	E	A	T	M	K	A	I	E	Y	A	K	K	Y	N	V	P	V	V	L	T	L	G	T	K	F	V	I	A	E	N	P	Q	W	W	Q	Q	F	L	K	D	H	V	S	I	L	A	M	N	E	D	E	A	E	A	L	T	G	E	S	D	P	L	L	A	S	D
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.																																									.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.																																									.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	.	.	.	.	.	.	.	.	L	E	I	P	V	A	T	A	L	A	A	A	R	A	A	Q	S	A	D	A	V	V	M	V	N	A	S	P	A	G	Q	D	R	S	S	L	Q	D	L	A	.	.	.	.	A	I	A	D	V	V	I	A	N	E	H	E	A	N	D	W	P	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			.	.	.	.	.	.	.	.	S	S	S															T	T									S	S				T	G	G	G					.	.	.	.				S											T		S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.																																									.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144									.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	D	W	V	D	L	V	L	C	T	A	G	P	I	G	L	Y	M	A	G	F	T	E	D	E	A	K	R	K	T	Q	H	P	L	L	P	G	A	I	A	E	F	N	Q	Y	E	F	S	R	A	M	R	H	K	D	C	Q	N	P	L	R	V	Y	S	H	I	A	P	Y	M	G	G	P	E	K	I	M	N
Query Conservation
Alig confidence		.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	S	P	P	T	H	F	V	I	T	L	G	V	R	G	A	R	Y	V	G	A	D	G	V	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	A	P	T	V	T	P	V	D
Template Known Secondary structure		.	.	.	S			S							G	G	G							T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S
Template Predicted Secondary structure		.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																																											.	.	.	230	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	G	A	G	D	G	A	L	A	A	L	L	H	D	I	T	A	N	S	Y	H	R	S	N	V	P	N	S	S	K	H	K	F	T	W	L	T	Y	S	S	L	A	Q	V	C	K	Y	A	N	R	V	S	Y	Q	V	L	N	Q	H	S	P	R	L	T	R	G	L	P	E	R	E	D
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Sequence		T	A	G	A	G	D	V	F	A	G	V	L	A	A	N	W	P	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	S	P	A	E	R	L	R	A	L	R	R	A	C	A	A	G	A	L	A	T	L	V	S	G	V	G	.	.	D	C	A	P	A	A	A	A
Template Known Secondary structure			T	T													S			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																					T	T	S	S	S	S	S	.	.	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.																	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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