Job Description P0A8V6 Confidence 88.76% Date Thu Jan 5 11:08:48 GMT 2012 Rank 201 Aligned Residues 140 % Identity 11% Template d1ulya_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Hypothetical protein PH1932 Resolution 2.50

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.															.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	R	E	L	S	E	L	I	G	V	T	R	T	T	L	R	E	V	L	Q	R	L	A	R	D	G	W	L	T	.	.	I	Q	H	G	K	P	T	K	V	N	N	F	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	S	G	L	N	I	L	E	T	L	A	R	L	D	H	E	S	V	P	Q
Query Conservation																																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	S	Q	L	S	E	I	L	G	K	T	P	Q	T	I	Y	H	H	I	E	K	L	K	E	A	G	L	V	E	V	K	R	T	E	X	K	G	N	L	V	E	K	Y	Y	G	R	T	A	D	V	F	Y	I	N	L	Y	L	G	D	E	E	L	R	Y	I	A	R	S	R	L	K	T	K	I	D	I	F	K	R
Template Known Secondary structure											T																T	T	S										T	T									S	S	S						S		S	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	D	N	L	L	S	V	R	T	N	I	S	T	I	F	I	R	T	A	F	R	Q	H	P	D	K	A	Q	E	V	L	A	T	A	N	E	V	A	D	H	A	D	A	F	A	E	L	D	Y	N	I	F	R	G	L	A	F	A	S	G	N	P	I	Y	G	L	I	L	N	G	M	K	G	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	Y	Q	F	E	E	N	E	L	L	N	I	X	D	R	X	S	Q	K	E	F	D	A	T	V	R	I	S	K	Y	I	E	E	K	E	D	A	L	K	D	F	S	N	E	D	I	I	H	A	I	E	W	L	S	T	A	E	L	A	R	D	E	E	Y	L	E	L	L	K	R	L	G	S	I	L
Template Known Secondary structure		T	T																																	T	G	G	G	G	T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions