Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8V6
Confidence27.92%DateThu Jan 5 11:08:48 GMT 2012
Rank476Aligned Residues21
% Identity43%Templatec3nzlA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:dna-binding protein satb1; PDBTitle: crystal structure of the n-terminal domain of dna-binding protein2 satb1 from homo sapiens, northeast structural genomics consortium3 target hr4435b
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50........
Predicted Secondary structure 






Query SS confidence 



























Query Sequence  LPAERELSELIGVTRTTLREVLQRLARD
Query Conservation 



  

   



 





  
  
Alig confidence 




.......















Template Conservation 

 

.......
 
 






 



Template Sequence  LPPEQ. . . . . . . WSHTTVRNALKDLLKD
Template Known Secondary structure 

GGG.......

TTT
Template Predicted Secondary structure 

.......

Template SS confidence 



























   12.... ...20.........30..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions