Job Description P0A8V6 Confidence 96.29% Date Thu Jan 5 11:08:48 GMT 2012 Rank 49 Aligned Residues 93 % Identity 9% Template c3nqoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:marr-family transcriptional regulator; PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution Resolution 2.20 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence		P	G	T	I	L	P	A	E	R	E	L	S	E	L	I	G	V	T	R	T	T	L	R	E	V	L	Q	R	L	A	R	D	G	W	L	T	I	Q	H	.	.	.	.	G	K	P	T	K	V	N	N	F	W	E	T	S	G	L	N	I	L	E	T	L	A	R	L	D	H	E	S	V	P	Q	L	I	D	N	L	L
Query Conservation																																									.	.	.	.
Alig confidence							.																																		.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	E	E	T	.	T	L	N	N	I	A	R	K	X	G	T	S	K	Q	N	I	N	R	L	V	A	N	L	E	K	N	G	Y	V	D	V	I	P	S	P	H	D	K	R	A	I	N	V	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	L	G	K	K	V	X	V	T	C	S
Template Known Secondary structure			G	G	G		.										T	S															T	T	S							S	S		T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																		.	.	.	.	.	.	.	110	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	R	T	N	I	S	T	I	F	I	R	T	A	F	R	Q	H	P	D	K	A	Q	E	V	L	A	T	A	N	E	V	A	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	G	I	N	F	X	A	D	V	F	H	E	F	T	K	D	E	L	E	T	L	W	S	L	L	K	K	X	Y	R	F	N	G	E
Template Known Secondary structure												T	T	T																		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions