Job Description P0A8V6 Confidence 90.98% Date Thu Jan 5 11:08:48 GMT 2012 Rank 190 Aligned Residues 99 % Identity 15% Template c2plyB_ PDB info PDB header:translation/rna Chain: B: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna. Resolution 2.60 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	Y	I	I	E	S	I	W	N	N	R	F	P	P	G	T	I	L	P	A	E	R	E	L	S	E	L	I	G	V	T	R	T	T	L	R	E	V	L	Q	R	L	A	R	D	G	W	L	T	I	Q	H	G	K	P	T	K	V	N	N	F	W	E	T	S	G	L	N	I	L	E	T	L	A	R	L	D	H	E
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		Q	K	K	L	L	K	D	L	E	D	K	Y	R	V	S	R	W	Q	P	P	W	V	K	E	V	A	G	S	F	N	L	D	P	S	E	L	E	E	L	L	H	Y	L	V	R	E	G	V	L	V	K	I	.	N	D	E	F	Y	W	H	R	Q	A	L	G	E	A	R	E	V	I	K	N	L	A	S	T	G	P	F
Template Known Secondary structure																	T	T	S											T	T																	T	S				S	.	S	S	S																				T	T	S		B
Template Predicted Secondary structure																																																						.
Template SS confidence
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.		.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	P	Q	L	I	D	N	L	L	S	V	R	T	N	I	S	T	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	A	E	A	R	D	A	L	G	S	S	R	K	Y	V	L	P	L	L
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions