Job Description P0A8V6 Confidence 29.44% Date Thu Jan 5 11:08:48 GMT 2012 Rank 467 Aligned Residues 60 % Identity 17% Template c1xb4C_ PDB info PDB header:unknown function Chain: C: PDB Molecule:hypothetical 23.6 kda protein in yuh1-ura8 PDBTitle: crystal structure of subunit vps25 of the endosomal2 trafficking complex escrt-ii Resolution 3.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.
Query SS confidence																																						.	.	.	.	.
Query Sequence		Q	S	P	A	G	F	A	E	E	Y	I	I	E	S	I	W	N	N	R	F	P	P	G	T	I	L	P	A	E	R	E	L	S	E	L	I	.	.	.	.	.	G	V	T	R	T	T	L	R	E	V	L	Q	R	L	A	R	D	G	W	L	T	I	Q	H	G	K	P
Query Conservation																																						.	.	.	.	.
Alig confidence							.																.					.										.	.	.	.	.
Template Conservation							.																.					.
Template Sequence		K	S	L	D	S	.	W	A	S	L	I	L	Q	W	F	E	D	S	G	K	L	.	N	Q	V	I	.	T	L	Y	E	L	S	E	T	V	N	W	E	F	H	R	M	P	E	S	L	L	Y	Y	C	L	K	P	L	C	D	R	N	R	A	T	M	L	K	D	E	N
Template Known Secondary structure		S					.											T	T	S		T	.	T	S			.		T	T	T	T						S	T	T	T	T															G	G	G								T	T
Template Predicted Secondary structure							.																.					.
Template SS confidence
		126	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions