|   |
1 | . | . | . | . | . | . | |
. | . | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | K | R | R | V | V | . |
V | T | G | L | G | M | L | S | P | V | G | . |
N | T | V | E | S | T | W | K | A | L | L | A | G | Q | S | G | I | S | L | I | D | H | F | D | T | S | A | Y | A | T | K | F | A | G | L | V | K | D | F | N | C | E | D | I | I | S | R | K | E | Q | R | K | M | D | A | F | I | Q | Y | G |
Query Conservation |   |
|   |   |   |   |
|
| . |
|
|
|   |
|   |
|   |
|   |
| . |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
Template Sequence |   |
V | P | E | R | R | F | S | R | V | L | G | V | G | S | Y | R | P | R | R | E | V | S | N | K | E | V | C | T | . |
. |
. |
. |
. |
. |
. |
W | I | D | S | T | E | E | W | I | E | T | R | T | G | I | R | S | R | R | I | A | E | P | D | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | I | Q | V | M | G |
Template Known Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | T | S | S |
|
|  |  |  |  |  |  |  |  |
|
| S |  |  |  |
|
|
| T | T |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 60 | . | . | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
. | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Query Sequence |   |
I | V | A | G | V | Q | A | M | Q | D | S | G | L | E | I | T | E | E | N | A | T | R | I | G | A | A | I | G | S | G | I | G | G | L | G | L | I | E | E | N | H | T | S | L | M | N | G | G | P | R | K | I | S | P | F | F | V | P | S | T | I | V | N | M | V | A | G | H | L | T | I | M | Y | G | L | R | G | . |
P | S |
Query Conservation |   |
|   |
|
|   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |
|   |
| . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |
|
| . | . | . | . |   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
V | A | A | S | R | R | A | L | E | H | A | G | V | D | P | A | E | I | D | . |
. |
. |
. |
L | V | V | V | S | T | M | T | N | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | H | T | P | P | L | S | V | A | I | A | H | E | L | G | A | D | N | A | G | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |
|
| . | . | . | . |  |  |  |  |  |
| S |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| S | S |
|  |  |  |  |  |  |  |  |  | T |
| T | T |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
| . | . | . | . |  |  |  |  |  |
|  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
|
|
. | . | . | . | . | . | 90 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
  |
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | I | A | T | A | C | T | S | G | V | H | N | I | G | H | A | A | R | I | I | A | Y | G | D | A | D | V | M | V | A | G | G | A | E | K | A | S | T | P | L | G | V | G | G | F | G | A | A | R | A | L | S | T | R | N | D | N | P | Q | A | A | S | R | P | W | D | K | E | R | D | G | F | V | L | G | D | G | A | G |
Query Conservation |   |
  |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|
|
|
|   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
Template Sequence |   |
F | D | L | S | A | A | C | A | G | F | C | H | A | L | S | I | A | A | D | A | V | E | S | G | G | S | R | H | V | L | V | V | A | T | E | R | M | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | V | I | D | L | A | D | R | S | L | S | F | L | F | G | D | G | A | G |
Template Known Secondary structure |   |
 |  |  |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
| S |
|  |  |  |  |  |  |  |  | G | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | G | S |
| S | S |
| T | T | T | T | T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
  |   |
238 | . | 240 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
M | L | V | L | E | E | Y | E |
Query Conservation |   |
  |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |   |
Template Sequence |   |
A | A | V | V | G | P | S | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
172 | . | . | . | . | . | . | . |
  |