Job Description P0AAI5 Confidence 98.99% Date Thu Jan 5 11:13:01 GMT 2012 Rank 100 Aligned Residues 194 % Identity 14% Template c3lehA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative hydroxymethylglutaryl-coa synthase; PDBTitle: the crystal structure of smu.943c from streptococcus mutans ua159 Resolution 1.70 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		V	A	G	H	L	T	I	M	Y	G	L	R	G	P	S	.	.	I	S	I	A	T	A	C	T	S	G	V	H	N	I	G	H	A	A	R	I	I	A	Y	G	D	A	D	V	M	V	A	G	G	A	E	K	A	S	T	P	L	G	V	G	G	F	G	A	A	R	A	L	S	T	R	N	D	N	P	Q	A	A	S
Query Conservation																	.	.
Alig confidence																	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	V	Y	V	H	S	L	L	G	I	Q	P	F	A	R	S	F	E	M	K	E	A	C	Y	S	A	T	A	A	L	N	Y	A	K	L	H	V	E	K	H	P	D	T	R	V	L	V	L	A	S	D	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T			S	S								S	T	T	T																S	T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	W	D	K	E	R	D	G	F	V	L	G	D	G	A	G	M	L	V	L	E	E	Y	E	H	A	K	K	R	G	A	K	I	Y	A	E	L	V	G	F	G	M	S	S	D	A	Y	H	M	T	S	P	P	E	N	G	A	G	A	A	L	A	M	A	N	A	L	R	D	A	G	I	E	A	S	Q	I	G	Y
Query Conservation
Alig confidence		.																																														.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		.	K	Y	I	G	T	P	G	E	S	T	Q	G	A	G	S	I	A	M	L	V	K	K	D	P	R	I	L	I	L	H	D	E	T	L	A	Q	T	R	D	I	S	T	K	Q	Y	.	.	.	.	.	.	.	.	.	.	L	D	M	L	K	T	T	W	A	E	Y	Q	K	R	F	D	V	S	L	T	D	F	A	A
Template Known Secondary structure		.					S	T	T	G	G	G													S		S	S					S															.	.	.	.	.	.	.	.	.	.																T			G	G	G		S
Template Predicted Secondary structure		.																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
			142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.											.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.							.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		V	N	A	H	G	T	S	T	P	A	G	D	K	A	E	A	.	.	.	.	.	.	Q	A	V	K	T	I	F	G	E	A	A	S	R	V	L	V	S	S	T	K	S	M	T	G	H	L	L	G	A	A	G	A	V	E	S	I	Y	S	I	L	A	L	R	D	Q	A	V	P	P	T	I	N	L	D	N	P	D	E
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	C	F	H	L	P	F	P	K	L	A	L	K	G	F	N	K	I	D	K	Q	P	S	D	L	Q	E	K	L	K	V	N	F	E	A	S	I	L	Y	S	K	.	.	Q	I	G	N	I	Y	T	G	S	L	F	L	G	L	L	S	L	L	E	N	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S																																			.	.			B			G	G	G														S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	D	L	D	F	V	P	H	E	A	R	Q	V	S	G	M	E	Y	T	L	C	N	S	F	G	F	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	N	L	V	A	G	D	K	I	A	L	F	S	Y	G	S	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	S			T	T										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions