Job Description P0AAI5 Confidence 99.54% Date Thu Jan 5 11:13:01 GMT 2012 Rank 78 Aligned Residues 336 % Identity 14% Template c3e1hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a type iii polyketide synthase2 pksiiinc from neurospora crassa Resolution 2.58 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.											.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	K	R	R	V	V	V	T	G	L	G	M	L	S	P	V	G	N	T	V	E	S	T	W	K	A	L	L	A	G	Q	S	G	.	.	.	.	.	.	.	.	.	.	I	S	L	I	D	H	F	D	T	S	A	Y	A	T	K	F	A	G	L	V	K	D	F	N	C	E	D	I	I	S	R	K	E	Q	R	K
Query Conservation																																				.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.
Template Sequence		L	G	.	.	.	L	S	I	T	G	L	G	V	Q	Y	P	P	Y	S	L	G	P	D	A	I	D	I	L	S	K	R	Y	H	P	E	S	P	A	M	K	K	V	L	A	I	N	R	Y	T	G	I	D	Q	R	S	S	I	G	N	P	D	H	P	L	V	N	K	P	N	P	P	T	V	K	E	L	H	E	V	F
Template Known Secondary structure				.	.	.												S	S			B		T						T		S	S	S													T	T	T	S					B			S	S		T	T		G	G	G	S	S	S	S
Template Predicted Secondary structure				.	.	.
Template SS confidence
		10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	A	F	I	Q	Y	G	I	V	A	G	V	Q	A	M	Q	D	S	G	L	E	I	T	E	E	N	A	T	R	I	G	A	A	I	G	S	G	I	G	G	L	G	L	I	E	E	N	H	T	S	L	M	N	G	G	P	R	K	I	S	P	F	F	V	P	S	T	I	V	N	M	V	A	G	H	L	T	I	M
Query Conservation
Alig confidence																													.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	S	D	G	V	P	L	A	V	E	A	S	R	K	A	M	A	E	A	R	L	V	P	A	Q	I	T	.	.	.	.	H	M	V	S	T	T	C	T	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	P	G	Y	D	H	Y	V	A	K	E
Template Known Secondary structure					T																T			G	G	G			.	.	.	.							S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																													.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.																												.	.	.	.	.	.	130	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure														.	.	.																			.	.	.	.
Query SS confidence														.	.	.																			.	.	.	.
Query Sequence		Y	G	L	R	G	P	S	I	S	I	A	T	.	.	.	A	C	T	S	G	V	H	N	I	G	H	A	A	R	I	I	A	Y	.	.	.	.	G	D	A	D	V	M	V	A	G	G	A	E	K	A	S	T	P	L	G	V	G	G	F	G	A	A	R	A	L	S	T	R	N	D	N	P	Q	A	A	S	R	P	W
Query Conservation														.	.	.																			.	.	.	.
Alig confidence														.	.	.																			.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	L	S	D	R	L	E	K	V	L	L	H	G	I	G	C	S	G	G	L	A	A	L	R	T	A	A	N	L	C	L	G	H	T	A	R	G	K	P	A	R	I	L	V	L	A	L	E	V	S	T	T	M	V	R	S	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	I	D	A	L	Q
Template Known Secondary structure			T			T	T								S		G	G	G																			T	T														G	G	G						.	.	.	.	.	.	.	.	.	.	.	.	.	.							T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.															.	.	.	.	.	200	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.																									.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	E	R	D	G	F	V	L	G	D	G	A	G	M	L	V	L	E	E	Y	E	H	A	K	K	R	G	A	K	I	Y	A	E	L	V	G	F	G	M	S	S	D	A	Y	H	M	T	S	P	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	A	G
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	R	I	G	I	A	L	F	S	D	C	A	S	A	V	I	L	S	N	G	I	G	E	A	P	G	K	P	A	I	Y	D	L	L	G	W	E	N	R	V	I	P	D	S	E	H	D	L	G	F	D	V	D	P	M	G	W	K	V	V	L	S	P	R	V	P	V	L	A	K	A	S	L	Q	P	T	Y	A	D
Template Known Secondary structure										B													T	T			T	T				S												T	T		T	T	T							T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		A	A	L	A	M	A	N	A	L	R	D	A	G	I	E	A	S	Q	I	G	Y	V	N	A	H	G	T	S	T	P	A	G	D	K	A	E	A	Q	A	V	K	T	I	F	G	E	A	A	S	R	V	L	V	S	.	S	T	K	S	M	T	G	H	L	L	G	A	A	G	A	V	E	S	I	Y	S	I	L	A	L
Query Conservation																																																								.
Alig confidence																									.								.	.	.	.	.																			.																							.	.	.
Template Conservation																									.								.	.	.	.	.																																										.	.	.
Template Sequence		L	L	S	S	L	Q	D	Q	L	P	S	S	Y	Q	K	P	A	D	F	D	W	A	M	.	H	P	G	G	A	T	I	.	.	.	.	.	L	S	G	A	E	S	A	M	G	L	T	P	E	H	M	R	A	S	Y	D	R	Y	I	N	H	G	N	S	S	S	A	T	I	F	S	V	L	N	R	L	R	.	.	.
Template Known Secondary structure							G	G	G	S		T	T	S		S	G	G	G	S					.			S	S				.	.	.	.	.									T			G	G	G	G												B		G	G	G										T	.	.	.
Template Predicted Secondary structure																									.								.	.	.	.	.																																										.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.						.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	Q	A	V	P	P	T	I	N	L	D	N	P	D	E	G	C	D	L	D	F	V	P	H	E	A	R	Q	V	S	G	M	E	Y	T	L	C	N	S	F	G	F	G	G	T	N	G	S	L	I	F	K	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	D	M	D	A	L	A	P	G	G	K	V	K	.	E	Y	V	V	G	C	A	F	G	P	G	I	N	V	E	M	C	M	L	K	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	T	T	S		S	S	S	S				.	S									T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
																				353	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.