Job Description P0AAI5 Confidence 99.87% Date Thu Jan 5 11:13:01 GMT 2012 Rank 66 Aligned Residues 309 % Identity 20% Template c2x3eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 3; PDBTitle: crystal structure of 3-oxoacyl-(acyl carrier protein)2 synthase iii, fabh from pseudomonas aeruginosa pao1 Resolution 1.81 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		R	R	V	V	V	T	G	L	G	M	L	S	P	V	.	G	N	T	V	E	S	T	W	K	A	L	L	A	G	Q	S	G	I	S	L	I	D	H	F	D	T	S	A	Y	A	T	K	F	A	G	L	V	K	D	F	N	C	E	D	I	I	S	R	K	E	Q	R	K	M	D	A	F	I	Q	Y	G	I	V	A	G
Query Conservation																.
Alig confidence																.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	A	V	V	C	G	L	G	S	Y	L	P	E	A	V	L	S	N	D	M	L	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	D	T	S	D	A	W	I	S	S	R	T	G	V	R	Q	R	H	I	A	G	D	L	G	S	G	D	L	A	L	R	A	A
Template Known Secondary structure															S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T																			T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.																							.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		V	Q	A	M	Q	D	S	G	L	E	I	T	E	E	N	A	T	R	I	G	A	A	I	G	S	G	I	G	G	L	G	L	I	E	E	N	H	T	S	L	M	N	G	G	P	R	K	I	S	P	F	F	V	P	S	T	I	V	N	M	V	A	G	H	L	T	I	M	Y	G	L	R	G	.	P	S	I	S	I	A
Query Conservation																																																																											.
Alig confidence												.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation												.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	A	L	A	S	A	G	L	E	.	.	.	.	.	.	R	V	D	A	V	V	L	A	T	S	T	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	C	C	P	A	T	A	P	R	V	A	A	R	L	G	L	V	G	A	L	A	F	D	L	S
Template Known Secondary structure									T		S	.	.	.	.	.	.			S							S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S		S								T	T		T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.																											.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	C	T	S	G	V	H	N	I	G	H	A	A	R	I	I	A	Y	G	D	A	D	V	M	V	A	G	G	A	E	K	A	S	T	P	L	G	V	G	G	F	G	A	A	R	A	L	S	T	R	N	D	N	P	Q	A	A	S	R	P	W	D	K	E	R	D	G	F	V	L	G	D	G	A	G	M	L	V	L
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.
Template Sequence		A	A	A	T	G	F	V	Y	G	L	A	S	V	G	S	L	I	S	A	G	L	A	D	S	A	L	L	V	G	V	D	T	F	S	H	T	L	D	P	A	D	R	S	T	R	A	L	F	G	D	G	.	.	.	.	.	.	.	.	.	A	G	A	V	V	L	R	A	G	D	A	E	E	E	G	A	L	L	A	F
Template Known Secondary structure			G	G	G															T	T	S		S										G	G	G	G	S		T	T								B				.	.	.	.	.	.	.	.	.											T	T	S	T	T	B
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.										160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.									.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.
Query Sequence		E	E	Y	E	H	A	K	K	R	G	A	K	I	Y	A	E	L	V	G	F	G	M	S	S	D	A	Y	H	M	T	S	P	P	E	N	G	A	G	A	A	.	.	.	.	.	.	.	.	L	A	M	A	N	A	L	R	D	A	G	I	E	A	S	Q	I	G	Y	V	N	A	H	G	T	S	T	P	A	G	D	K
Query Conservation																																										.	.	.	.	.	.	.	.
Alig confidence								.																																		.	.	.	.	.	.	.	.																														.	.	.
Template Conservation								.																																																																							.	.	.
Template Sequence		D	L	G	S	D	G	.	H	Q	F	D	L	L	M	T	P	A	V	S	R	A	E	R	S	S	G	Q	A	S	N	Y	F	R	M	D	G	K	A	V	F	G	Q	A	V	T	Q	M	S	D	S	V	R	R	V	L	D	R	V	G	W	Q	A	S	D	L	H	H	L	V	P	H	Q	A	N	T	R	I	.	.	.
Template Known Secondary structure							G	.	G	G	T	T	S														T																																	T			G	G	G		S												.	.	.
Template Predicted Secondary structure								.																																																																							.	.	.
Template SS confidence
		180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	Q	A	V	K	T	I	F	G	E	A	A	S	R	V	L	V	S	S	T	K	S	M	T	G	H	L	L	G	A	A	G	A	V	E	S	I	Y	S	I	L	A	L	R	D	Q	A	V	P	P	T	I	N	L	D	N	P	D	E	G	C	D	L	D	F	V	P	H	E	A	R	Q	V	S	G	M	E	Y
Query Conservation
Alig confidence		.	.																	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	L	A	A	V	A	D	Q	L	D	L	P	V	E	R	V	V	.	.	S	N	I	A	E	V	G	N	T	V	A	A	S	I	P	L	A	L	A	H	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	G	I	L	R	D	G	G	N
Template Known Secondary structure		.	.									T			G	G	G	B		.	.								B		G	G	G											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S		T	T
Template Predicted Secondary structure		.	.																	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.																													.	.	.	.	.	.	300	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	C	N	S	F	G	F	G	G	T	N	G	S	L	I	F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	V	L	T	G	F	G	A	G	L	T	W	G	S	V	A	L	R
Template Known Secondary structure									T	T	T
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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