Job Description P0AAI5 Confidence 100.00% Date Thu Jan 5 11:13:01 GMT 2012 Rank 17 Aligned Residues 404 % Identity 41% Template c2wggA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 1; PDBTitle: crystal structure of mycobacterium tuberculosis c171q kasa2 variant with bound tlm Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		S	K	R	R	V	V	V	T	G	L	G	M	L	S	P	V	G	N	T	V	E	S	T	W	K	A	L	L	A	G	Q	S	G	I	S	L	I	D	.	.	H	F	D	T	S	A	Y	A	T	K	F	A	G	L	V	K	D	F	N	C	E	D	I	I	S	R	K	E	Q	R	K	M	D	A	F	I	Q	Y	G	I
Query Conservation																																								.	.
Alig confidence																																								.	.																		.
Template Conservation																																																											.
Template Sequence		G	F	P	S	V	V	V	T	A	V	T	A	T	T	S	I	S	P	D	I	E	S	T	W	K	G	L	L	A	G	E	S	G	I	H	A	L	E	D	E	F	V	T	K	W	D	L	A	V	K	I	G	G	H	L	K	D	.	P	V	D	S	H	M	G	R	L	D	M	R	R	M	S	Y	V	Q	R	M	G	K
Template Known Secondary structure		S	S													S	S		S	S										T	T									S							T		S					B			S	S	.		G	G	G	G									S
Template Predicted Secondary structure																																																											.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	G	V	Q	A	M	Q	D	S	G	L	E	I	T	E	E	N	A	T	R	I	G	A	A	I	G	S	G	I	G	G	L	G	L	I	E	E	N	H	T	S	L	M	N	G	G	P	R	K	I	S	P	F	F	V	P	S	T	I	V	N	M	V	A	G	H	L	T	I	M	Y	G	L	R	G	P	S	I	S
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		L	L	G	G	Q	L	W	E	S	A	G	S	P	E	.	.	V	D	P	D	R	F	A	V	V	V	G	T	G	L	G	G	A	E	R	I	V	E	S	Y	D	L	M	N	A	G	G	P	R	K	V	S	P	L	A	V	Q	M	I	M	P	N	G	A	A	A	V	I	G	L	Q	L	G	A	R	A	G	V	M	T
Template Known Secondary structure											T	T				.	.			G	G	G								S	S		S																G	G	G	S		T	T						S	T	T											T			S
Template Predicted Secondary structure																.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	A	C	T	S	G	V	H	N	I	G	H	A	A	R	I	I	A	Y	G	D	A	D	V	M	V	A	G	G	A	E	K	A	S	T	P	L	G	V	G	G	F	G	A	A	R	A	L	S	T	R	N	D	N	P	Q	A	A	S	R	P	W	D	K	E	R	D	G	F	V	L	G	D	G	A	G	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	S	A	Q	S	S	G	S	E	A	I	A	H	A	W	R	Q	I	V	M	G	D	A	D	V	A	V	C	G	G	V	E	G	P	I	E	A	L	P	I	A	A	F	S	M	M	R	A	M	S	T	R	N	D	E	P	E	R	A	S	R	P	F	D	K	D	R	D	G	F	V	F	G	E	A	G	A	L	M
Template Known Secondary structure					G	G	G															T	T	S		S																					T	T	T		B				T	T	S	G	G	G	S			T	T	B	T	T			S	B		B	B
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	E	Y	E	H	A	K	K	R	G	A	K	I	Y	A	E	L	V	G	F	G	M	S	S	D	A	Y	H	M	T	S	P	P	E	N	G	A	G	A	A	L	A	M	A	N	A	L	R	D	A	G	I	E	A	S	Q	I	G	Y	V	N	A	H	G	T	S	T	P	A	G	D	K	A	E	A	Q	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	E	T	E	E	H	A	K	A	R	G	A	K	P	L	A	R	L	L	G	A	G	I	T	S	D	A	F	H	M	V	A	P	A	A	D	G	V	R	A	G	R	A	M	T	R	S	L	E	L	A	G	L	S	P	A	D	I	D	H	V	N	A	H	G	T	A	T	P	I	G	D	A	A	E	A	N	A	I
Template Known Secondary structure													T				S													S		S	S	S			T	T																T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	I	F	G	E	A	A	S	R	V	L	V	S	S	T	K	S	M	T	G	H	L	L	G	A	A	G	A	V	E	S	I	Y	S	I	L	A	L	R	D	Q	A	V	P	P	T	I	N	L	D	N	P	D	E	G	C	D	L	D	F	V	P	H	E	A	R	Q	V	S	G	M	E	Y	T	L	C	N	S	F
Query Conservation
Alig confidence								.	.	.																																																												.
Template Conservation								.	.	.																																																												.
Template Sequence		R	V	A	G	C	D	.	.	.	Q	A	A	V	Y	A	P	K	S	A	L	G	H	S	I	G	A	V	G	A	L	E	S	V	L	T	V	L	T	L	R	D	G	V	I	P	P	T	L	N	Y	E	T	P	D	P	E	I	D	L	D	V	V	A	G	E	P	R	Y	.	G	D	Y	R	Y	A	V	N	N	S	F
Template Known Secondary structure				T	T		T	.	.	.	T	S					T						B		T	T	T																T						T	T			S	B		T	T								S	S				.
Template Predicted Secondary structure								.	.	.																																																												.
Template SS confidence
		327	.	.	330	.	.				.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	G	G	T	N	G	S	L	I	F	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	G	G	H	N	V	A	L	A	F	G	R
Template Known Secondary structure			T	T	T
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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