Job Description P0AAI5 Confidence 100.00% Date Thu Jan 5 11:13:01 GMT 2012 Rank 6 Aligned Residues 410 % Identity 46% Template c2iwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase; PDBTitle: human mitochondrial beta-ketoacyl acp synthase Resolution 2.06 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.
Query Sequence		K	R	R	V	V	V	T	G	L	G	M	L	S	P	V	G	N	T	V	E	S	T	W	K	A	L	L	A	G	Q	S	G	I	S	L	I	D	H	F	D	T	S	A	Y	A	T	K	F	A	G	L	.	.	.	.	.	.	V	K	D	F	N	C	E	D	I	I	S	R	K	E	Q	R	K	M	D	A	F	I	Q
Query Conservation																																																					.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.
Template Conservation
Template Sequence		H	R	R	V	V	I	T	G	I	G	L	V	T	P	L	G	V	G	T	H	L	V	W	D	R	L	I	G	G	E	S	G	I	V	S	L	V	G	E	E	Y	K	S	I	P	C	S	V	A	A	Y	V	P	R	G	S	D	E	G	Q	F	N	E	Q	N	F	V	S	K	S	D	I	K	S	M	S	S	P	T	I
Template Known Secondary structure															T	T			S										T	T									S	G	G	G	T	T		S									B	S	S	S	T	T		B		G	G	G	T	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		Y	G	I	V	A	G	V	Q	A	M	Q	D	S	G	L	E	.	I	T	E	E	N	A	T	R	I	G	A	A	I	G	S	G	I	G	G	L	G	L	I	E	E	N	H	T	S	L	M	N	G	G	P	R	K	I	S	P	F	F	V	P	S	T	I	V	N	M	V	A	G	H	L	T	I	M	Y	G	L	R	G
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		M	A	I	G	A	A	E	L	A	M	K	D	S	G	W	H	P	Q	S	E	A	D	Q	V	A	T	G	V	A	I	G	M	G	M	I	P	L	E	V	V	S	E	T	A	L	N	F	Q	T	K	G	Y	N	K	V	S	P	F	F	V	P	K	I	L	V	N	M	A	A	G	Q	V	S	I	R	Y	K	L	K	G
Template Known Secondary structure															T					S						T								S																			G	G	G	S		T	T							T	T											T			S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	I	S	I	A	T	A	C	T	S	G	V	H	N	I	G	H	A	A	R	I	I	A	Y	G	D	A	D	V	M	V	A	G	G	A	E	K	A	S	T	P	L	G	V	G	G	F	G	A	A	R	A	L	S	T	R	N	D	N	P	Q	A	A	S	R	P	W	D	K	E	R	D	G	F	V	L	G	D	G
Query Conservation
Alig confidence																																																										.
Template Conservation																																																										.
Template Sequence		P	N	H	A	V	S	T	A	C	T	T	G	A	H	A	V	G	D	S	F	R	F	I	A	H	G	D	A	D	V	M	V	A	G	G	T	D	S	C	I	S	P	L	S	L	A	G	F	S	R	A	R	A	L	S	T	.	N	S	D	P	K	L	A	C	R	P	F	H	P	K	R	D	G	F	V	M	G	E	G
Template Known Secondary structure									G	G	G																T	S		S												S										T	T		B			.		S		T	T	T	S			T	T		T	T				B		B	B
Template Predicted Secondary structure																																																										.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	M	L	V	L	E	E	Y	E	H	A	K	K	R	G	A	K	I	Y	A	E	L	V	G	F	G	M	S	S	D	A	Y	H	M	T	S	P	P	E	N	G	A	G	A	A	L	A	M	A	N	A	L	R	D	A	G	I	E	A	S	Q	I	G	Y	V	N	A	H	G	T	S	T	P	A	G	D	K	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	V	L	V	L	E	E	Y	E	H	A	V	Q	R	R	A	R	I	Y	A	E	V	L	G	Y	G	L	S	G	D	A	G	H	I	T	A	P	D	P	E	G	E	G	A	L	R	C	M	A	A	A	L	K	D	A	G	V	Q	P	E	E	I	S	Y	I	N	A	H	A	T	S	T	P	L	G	D	A	A	E
Template Known Secondary structure																T	T																	S		S	S	S			T	T																T			G	G	G										S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.			.	.	390	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		A	Q	A	V	K	T	I	F	G	E	A	A	S	R	V	L	V	S	S	T	K	S	M	T	G	H	L	L	G	A	A	G	A	V	E	S	I	Y	S	I	L	A	L	R	D	Q	A	V	P	P	T	I	N	L	D	N	P	D	E	G	C	D	L	D	F	V	P	H	E	A	R	Q	.	.	V	S	G	M	E	Y
Query Conservation																																																																										.	.
Alig confidence																																																																										.	.
Template Conservation
Template Sequence		N	K	A	I	K	H	L	F	K	D	H	A	Y	A	L	A	V	S	S	T	K	G	A	T	G	H	L	L	G	A	A	G	A	V	E	A	A	F	T	T	L	A	C	Y	Y	Q	K	L	P	P	T	L	N	L	D	C	S	E	P	E	F	D	L	N	Y	V	P	L	K	A	Q	E	W	K	T	E	K	R	F	I
Template Known Secondary structure										G	G	G	G	G	T	S											B		G	G	G																T					B	T	T		S				T	T			S				B	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	C	N	S	F	G	F	G	G	T	N	G	S	L	I	F	K	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	T	N	S	F	G	F	G	G	T	N	A	T	L	C	I	A	G	L
Template Known Secondary structure									T	T	T
Template Predicted Secondary structure
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.