Job Description P0AAI5 Confidence 100.00% Date Thu Jan 5 11:13:01 GMT 2012 Rank 11 Aligned Residues 405 % Identity 37% Template c2gp6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 2; PDBTitle: x-ray crystal structure of mycobacterium tuberculosis beta-2 ketoacyl acyl carrier protein synthase ii (mtkasb) Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		S	K	R	R	V	V	V	T	G	L	G	M	L	S	P	V	G	N	T	V	E	S	T	W	K	A	L	L	A	G	Q	S	G	I	S	L	I	D	.	.	H	F	D	T	S	A	Y	A	T	K	F	A	G	L	V	K	D	F	N	C	E	D	I	I	S	R	K	E	Q	R	K	M	D	A	F	I	Q	Y	G	I
Query Conservation																																								.	.
Alig confidence																																								.	.																		.
Template Conservation																																																											.
Template Sequence		A	F	P	Y	V	V	V	T	G	I	A	M	T	T	A	L	A	T	D	A	E	T	T	W	K	L	L	L	D	R	Q	S	G	I	R	T	L	D	D	P	F	V	E	E	F	D	L	P	V	R	I	G	G	H	L	L	E	.	E	F	D	H	Q	L	T	R	I	E	L	R	R	M	G	Y	L	Q	R	M	S	T
Template Known Secondary structure		T	S													S	S		S	S										T	T										T	T	T	T	T	T	T		S					B			S		.		S	S	T	T	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	G	V	Q	A	M	Q	D	S	G	L	E	I	T	E	E	N	A	T	R	I	G	A	A	I	G	S	G	I	G	G	L	G	L	I	E	E	N	H	T	S	L	M	N	G	G	P	R	K	I	S	P	F	F	V	P	S	T	I	V	N	M	V	A	G	H	L	T	I	M	Y	G	L	R	G	P	S	I	S
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		V	L	S	R	R	L	W	E	N	A	G	S	P	.	.	E	V	D	T	N	R	L	M	V	S	I	G	T	G	L	G	S	A	E	E	L	V	F	S	Y	D	D	M	R	A	R	G	M	K	A	V	S	P	L	T	V	Q	K	Y	M	P	N	G	A	A	A	A	V	G	L	E	R	H	A	K	A	G	V	M	T
Template Known Secondary structure											T	T			.	.				T	T	S							B	S	S		S	S								T	T	T	T	T	T		S	S	S	S		T	T						S	T	T										S				S
Template Predicted Secondary structure															.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		I	A	T	A	C	T	S	G	V	H	N	I	G	H	A	A	R	I	I	A	Y	G	D	A	D	V	M	V	A	G	G	A	E	K	A	S	T	P	L	G	V	G	G	F	G	A	A	R	A	L	S	T	R	N	.	D	N	P	Q	A	A	S	R	P	W	D	K	E	R	D	G	F	V	L	G	D	G	A	G	M
Query Conservation																																																								.
Alig confidence																																																								.
Template Conservation
Template Sequence		P	V	S	A	C	A	S	G	A	E	A	I	A	R	A	W	Q	Q	I	V	L	G	E	A	D	A	A	I	C	G	G	V	E	T	R	I	E	A	V	P	I	A	G	F	A	Q	M	R	I	V	M	S	T	N	N	D	D	P	A	G	A	C	R	P	F	D	R	D	R	D	G	F	V	F	G	E	G	G	A	L
Template Known Secondary structure			B		G	G	G																T	S		S																					T	S	S	S						T	T	S	S	S	S	S			T	T	B	T	T						B	B
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	E	E	Y	E	H	A	K	K	R	G	A	K	I	Y	A	E	L	V	G	F	G	M	S	S	D	A	Y	H	M	T	S	P	P	E	N	G	A	G	A	A	L	A	M	A	N	A	L	R	D	A	G	I	E	A	S	Q	I	G	Y	V	N	A	H	G	T	S	T	P	A	G	D	K	A	E	A	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	I	E	T	E	E	H	A	K	A	R	G	A	N	I	L	A	R	I	M	G	A	S	I	T	S	D	G	F	H	M	V	A	P	D	P	N	G	E	R	A	G	H	A	I	T	R	A	I	Q	L	A	G	L	A	P	G	D	I	D	H	V	N	A	H	A	T	G	T	Q	V	G	D	L	A	E	G	R	A
Template Known Secondary structure													T	T																	S		S	S	S			T	T															T	T			G	G	G										S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	T	I	F	G	E	A	A	S	R	V	L	V	S	S	T	K	S	M	T	G	H	L	L	G	A	A	G	A	V	E	S	I	Y	S	I	L	A	L	R	D	Q	A	V	P	P	T	I	N	L	D	N	P	D	E	G	C	D	L	D	F	V	P	H	E	A	R	Q	V	S	G	M	E	Y	T	L	C	N	S
Query Conservation
Alig confidence										.	.																																																												.
Template Conservation										.	.																																																												.
Template Sequence		I	N	N	A	L	G	G	N	.	.	R	P	A	V	Y	A	P	K	S	A	L	G	H	S	V	G	A	V	G	A	V	E	S	I	L	T	V	L	A	L	R	D	Q	V	I	P	P	T	L	N	L	V	N	L	D	P	E	I	D	L	D	V	V	A	G	E	P	R	P	.	G	N	Y	R	Y	A	I	N	N	S
Template Known Secondary structure						S		S		.	.							G	G	G	T	S		B		T	T	T																T						T	T		S	S	B		T	T								S	S				.
Template Predicted Secondary structure										.	.																																																												.
Template SS confidence
		326	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	F	G	G	T	N	G	S	L	I	F	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	F	G	G	H	N	V	A	I	A	F	G	R
Template Known Secondary structure				T	T	T
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions