Job Description P0AAI5 Confidence 100.00% Date Thu Jan 5 11:13:01 GMT 2012 Rank 7 Aligned Residues 407 % Identity 53% Template c1j3nB_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-oxoacyl-(acyl-carrier protein) synthase ii; PDBTitle: crystal structure of 3-oxoacyl-(acyl-carrier protein)2 synthase ii from thermus thermophilus hb8 Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	V	V	V	T	G	L	G	M	L	S	P	V	G	N	T	V	E	S	T	W	K	A	L	L	A	G	Q	S	G	I	S	L	I	D	H	F	D	T	S	A	Y	A	T	K	F	A	G	L	V	K	D	F	N	C	E	D	I	I	S	R	K	E	Q	R	K	M	D	A	F	I	Q	Y	G	I	V	A	G	V
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		R	R	V	V	V	T	G	L	G	A	L	T	P	I	G	V	G	Q	E	A	F	H	K	A	Q	L	A	G	K	S	G	V	R	P	I	T	R	F	D	A	S	A	L	P	V	R	I	A	A	E	V	D	.	V	D	P	G	A	Y	L	D	R	K	E	L	R	R	L	D	R	F	V	Q	Y	A	L	I	A	A	Q
Template Known Secondary structure														T	T			S										T	T									S	S			T	T	S	S									.			G	G	G	T	S		T	T	T	G	G	G	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	M	Q	D	S	G	L	E	I	T	E	E	N	A	T	R	I	G	A	A	I	G	S	G	I	G	G	L	G	L	I	E	E	N	H	T	S	L	M	N	G	G	P	R	K	I	S	P	F	F	V	P	S	T	I	V	N	M	V	A	G	H	L	T	I	M	Y	G	L	R	G	P	S	I	S	I	A	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	L	E	D	A	G	L	K	P	E	D	L	D	P	E	R	V	G	T	L	V	G	T	G	I	G	G	M	E	T	W	E	A	Q	S	R	V	F	L	E	R	G	P	N	R	I	S	P	F	F	I	P	M	M	I	A	N	M	A	S	A	H	I	A	M	R	Y	G	F	T	G	P	S	S	T	V	V	T	A
Template Known Secondary structure							T	T			G	G	G	S		G	G	G								S	S																		T	T	S	S		T	T						S	T	T											T			S								G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	S	G	V	H	N	I	G	H	A	A	R	I	I	A	Y	G	D	A	D	V	M	V	A	G	G	A	E	K	A	S	T	P	L	G	V	G	G	F	G	A	A	R	A	L	S	T	R	N	D	N	P	Q	A	A	S	R	P	W	D	K	E	R	D	G	F	V	L	G	D	G	A	G	M	L	V	L	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	A	T	G	A	D	A	L	G	S	A	L	R	M	I	Q	L	G	E	A	D	L	V	L	A	G	G	T	E	A	A	I	T	P	M	A	I	G	A	F	A	V	M	R	A	L	S	T	R	N	E	E	P	E	K	A	S	R	P	F	T	L	S	R	D	G	F	V	M	G	E	G	A	G	V	L	V	L	E	A
Template Known Secondary structure		G	G															T	T	S		S												S										T	T		B				T	T	S	G	G	G	S			T	T	B	T	T				B		B	B
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	H	A	K	K	R	G	A	K	I	Y	A	E	L	V	G	F	G	M	S	S	D	A	Y	H	M	T	S	P	P	E	N	G	A	G	A	A	L	A	M	A	N	A	L	R	D	A	G	I	E	A	S	Q	I	G	Y	V	N	A	H	G	T	S	T	P	A	G	D	K	A	E	A	Q	A	V	K	T	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	H	A	K	K	R	G	A	R	I	Y	A	E	L	V	G	F	G	R	S	A	D	A	H	H	I	T	E	P	H	P	E	G	K	G	A	A	L	A	M	A	R	A	L	K	D	A	G	I	A	P	E	Q	V	G	Y	I	N	A	H	G	T	S	T	P	V	G	D	R	A	E	V	L	A	I	K	R	V	F
Template Known Secondary structure									T																	S		S	S				T	T																T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	A	A	S	R	V	L	V	S	S	T	K	S	M	T	G	H	L	L	G	A	A	G	A	V	E	S	I	Y	S	I	L	A	L	R	D	Q	A	V	P	P	T	I	N	L	D	N	P	D	E	G	C	D	L	D	F	V	P	H	E	A	R	Q	V	S	G	M	E	Y	T	L	C	N	S	F	G	F	G	G
Query Conservation
Alig confidence																																																															.	.
Template Conservation																																																															.	.
Template Sequence		G	D	H	A	K	R	L	M	V	S	S	T	K	S	M	I	G	H	L	L	G	A	A	G	A	V	E	A	I	A	T	V	Q	A	L	Y	H	G	V	I	P	P	T	I	N	L	E	D	P	D	P	E	L	D	L	D	F	V	P	E	P	.	.	R	E	A	K	V	D	Y	A	L	S	N	S	F	A	F	G	G
Template Known Secondary structure		G	G	G	G	G	T						T						B		G	G	G																T						T	T	T	T	S	B		T	T			S	B			S	S		.	.						S									T	T	S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		404	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	G	S	L	I	F	K	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	N	A	V	L	A	F	K	R	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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