Job Description P0A8N7 Confidence 99.90% Date Thu Jan 5 11:08:21 GMT 2012 Rank 43 Aligned Residues 210 % Identity 23% Template d1jjca_ SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.60

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	V	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	L	M	E	R	E	L	V	E	I	F	R	A	L	G	Y	Q	A	V	E	G	P	E	V	E	S	E	F	F	N	F	D	A	L	N	I	P	E	H	H	P	A	R	D	M	W	D	T	F	W	L	T	G	E	G	F	R	L	E	G	P	L	G	E	E	V	E	G	R	L	L	L	R	T	H	T	S	P	M
Template Known Secondary structure															T	T	T								S								T	G	G	G	T			T	T	S	G	G	G	G	G	S				B				S	S						T	T	S					S						S	S	S	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		81	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure												.	.																																.	.
Query SS confidence												.	.																																.	.
Query Sequence		M	K	R	L	L	V	A	G	C	G	.	.	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	Y	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	.	.	Y	D	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P	A	A	E	S	L	S	Y	Q	Q	A	F	L	R	Y
Query Conservation												.	.																																.	.
Alig confidence												.	.																																.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	R	Y	M	V	A	H	T	P	P	F	R	I	V	V	P	G	R	V	F	R	F	E	Q	T	D	A	T	H	E	A	V	F	H	Q	L	E	G	L	V	V	G	E	G	I	A	M	A	H	L	K	G	A	I	Y	E	L	A	Q	A	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S		S	S													S				S	S			S												T	T																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	I	D	P	L	S	A	D	K	T	Q	L	R	E	V	A	A	K	L	D	L	S	N	V	A	D	T	E	E	D	R	D	T	L	L	Q	L	L	F	T	F	G	V	E	P	N	I	G	K	E	K	P	T	F	V	Y	H	F	P	A	S	Q	A	S	L	A	Q	I	S	T	E	D	H	R	V	A	E	R	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	D	S	K	V	R	F	Q	P	V	Y	F	P	F	V	E	P	G	A	Q	F	A	V	W	W	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											T	T												.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template SS confidence
																																																					246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	Y	Y	K	G	I	E	L	A	N	G	F	H	E	L	T	D	A	R	E	Q	Q	Q	R	F	E	Q	D	N	R	K	R	A	A	R	G	L	P	Q	H	P	I	D	Q	N	L	I	E	A	L	K	V	G	M	P	D	C	S	G	V	A	L	G	V	D	R	L	V	M	L	A	L	G	A	E	T	L	A	E
Query Conservation
Alig confidence																				.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	G	G	K	W	L	E	L	G	G	A	G	M	V	H	P	K	.	.	.	.	.	.	V	F	Q	A	V	D	A	Y	R	E	R	L	G	L	P	P	A	Y	R	G	V	.	.	.	.	.	.	.	.	.	.	.	T	G	F	A	F	G	L	G	V	E	R	L	A	M	L	R	Y	G	I	P	D	I	R	Y
Template Known Secondary structure		G	G	G	T															.	.	.	.	.	.											T	T	T						T	T		.	.	.	.	.	.	.	.	.	.	.																		T		S		G	G	G
Template Predicted Secondary structure																				.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310												.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions