Job Description P0A8N7 Confidence 100.00% Date Thu Jan 5 11:08:21 GMT 2012 Rank 26 Aligned Residues 294 % Identity 13% Template c3racA_ PDB info PDB header:ligase Chain: A: PDB Molecule:histidine-trna ligase; PDBTitle: crystal strucutre of histidine--trna ligase subunit from2 alicyclobacillus acidocaldarius subsp. acidocaldarius dsm 446. Resolution 2.30 Å

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		8	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure											.	.	.	.																																	.
Query SS confidence											.	.	.	.																																	.
Query Sequence		Q	P	S	A	S	I	P	N	L	.	.	.	.	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	.	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H	M	K
Query Conservation											.	.	.	.																																	.
Alig confidence											.	.	.	.																																	.
Template Conservation
Template Sequence		R	P	P	G	M	Q	D	G	Y	P	D	F	A	K	R	R	R	A	V	E	T	R	L	L	S	F	V	E	D	A	G	Y	E	P	V	T	S	G	L	F	E	Y	V	D	T	L	L	R	A	R	S	P	E	S	S	R	D	W	I	R	L	F	D	G	G	G	D	A	V	A	L	R	P	E	M	T	P	S	I	A
Template Known Secondary structure				T	T						T	T																			T	T								S									T	T	S		T	T	S						B					S	S	S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		83	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.																																						.																					.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.																																						.																					.	.	.	.	.	.	.
Query Sequence		R	L	L	V	.	.	.	.	.	.	A	G	C	G	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	Y	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	.	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P	A	.	.	.	.	.	.	.	A	E	S	L	S
Query Conservation						.	.	.	.	.	.																																						.																					.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																		.	.	.	.	.	.															.																					.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		R	M	A	A	P	R	V	A	A	G	R	T	P	I	R	W	C	Y	C	E	R	V	Y	R	R	T	A	.	.	.	.	.	.	A	E	S	T	Q	V	G	I	E	R	I	G	E	E	A	S	V	D	V	D	M	D	V	L	R	L	L	H	E	A	S	A	A	A	G	V	R	H	H	R	I	V	V	S	H	A	R
Template Known Secondary structure										T	T																		.	.	.	.	.	.												S	S																						T			S								T	T
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		Y	Q	Q	A	F	L	R	Y	L	E	I	D	P	L	S	A	D	K	T	Q	L	R	E	V	A	A	K	L	D	L	S	N	V	A	D	T	E	E	D	R	D	T	L	L	Q	L	L	F	T	F	G	V	E	P	N	I	G	K	E	K	P	.	.	T	F	V	Y	H	F	P	A	S	Q	A	S	L	A	Q	I	S
Query Conservation																																																															.	.
Alig confidence																.	.																																														.	.
Template Conservation																.	.
Template Sequence		L	V	P	R	L	L	D	A	L	G	I	S	A	S	.	.	L	S	R	A	F	L	A	C	L	T	S	G	N	Y	V	Q	F	R	E	L	W	Q	L	H	A	A	K	D	V	D	L	L	A	N	L	L	T	W	S	P	A	E	R	D	A	A	K	R	S	R	E	A	S	D	R	E	L	E	A	L	L	R	D	A
Template Known Secondary structure										T	T					.	.												T														S			S									B				S	S		T	T	S	B														T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.																	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	D	H	R	V	A	E	R	F	E	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	G	I	E	L	A	N	G	F	H	E	L	T	D	A	R	E	Q	Q	Q	R	F	E	Q	D	N	R	K	R	A	A	R	G	L	P	Q	H	P	I	D	Q	N	L	I	E	A	L	K	V	G
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.													.																	.
Template Conservation																																																	.													.																	.
Template Sequence		V	D	P	R	A	A	A	D	V	R	D	A	W	R	Y	L	C	R	L	A	E	A	L	H	D	S	G	L	A	S	D	V	V	T	F	D	L	A	L	H	R	E	L	D	Y	Y	T	.	G	L	V	F	E	M	F	A	P	G	V	G	.	A	P	I	A	Q	G	G	R	Y	D	E	L	L	A	Q	F	.	G	A
Template Known Secondary structure		S																										T			T	T	T					T	T				S		T	T			.	S								T	T		S	.	S		S							T	T	T	T	G	G	G	.	T
Template Predicted Secondary structure																																																	.													.																	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	D	C	S	G	V	A	L	G	V	D	R	L	V	M	L	A	L	G	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	P	A	V	G	F	A	F	E	V	E	R	V	M	A	V	L	E	A	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions