Job Description P0A8N7 Confidence 99.94% Date Thu Jan 5 11:08:21 GMT 2012 Rank 36 Aligned Residues 300 % Identity 12% Template c3netB_ PDB info PDB header:ligase Chain: B: PDB Molecule:histidyl-trna synthetase; PDBTitle: crystal structure of histidyl-trna synthetase from nostoc sp. pcc 7120 Resolution 2.70 Å

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		6	.	.		.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure					.									.	.	.	.
Query SS confidence					.									.	.	.	.
Query Sequence		S	W	Q	.	P	S	A	S	I	P	N	L	.	.	.	.	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H
Query Conservation					.									.	.	.	.
Alig confidence					.									.	.	.	.																																							.	.
Template Conservation																																																								.	.
Template Sequence		N	F	S	T	P	S	G	F	P	E	F	L	P	S	E	K	R	L	E	L	Y	L	L	D	T	I	R	R	V	Y	E	S	Y	G	F	T	P	I	E	T	P	A	V	E	R	L	E	V	L	Q	A	K	G	N	.	.	Q	D	N	I	I	Y	G	L	E	P	I	L	E	A	R	A	L	K	F	D	Q	T	V	P
Template Known Secondary structure							T	T																										T	T								S									T	T	T		.	.				B			B												S		S
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.																																			.	.																						.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.																																			.	.																						.	.	.	.	.	.	.
Query Sequence		M	K	R	L	L	V	A	G	C	G	.	.	.	.	.	.	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	Y	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	M	.	.	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P	A	A	E	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.																																			.	.																						.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.													.	.	.	.	.																		.	.																						.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.
Template Sequence		L	A	A	Y	I	A	R	H	L	N	D	L	T	F	P	F	A	R	Y	Q	X	D	V	V	F	R	G	E	.	.	.	.	.	R	F	R	Q	F	R	Q	C	D	I	D	V	V	G	R	E	K	L	S	L	L	Y	D	A	Q	X	P	A	I	I	T	E	I	F	E	A	V	N	I	G	D	F	V	I	R	I	N
Template Known Secondary structure										G	G	G	S		S	S												B		.	.	.	.	.			S												S	S				T																		T
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	S	Y	Q	Q	A	F	L	R	Y	L	E	I	D	P	L	S	A	D	K	T	Q	L	R	E	V	A	A	K	L	D	L	S	N	V	A	D	T	E	E	D	R	D	T	L	L	Q	L	L	F	T	F	G	V	E	P	N	I	G	K	E	K	P	T	F	V	Y	H	F	P	A	S	Q	A	S	L	A	Q	I
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.
Template Sequence		N	R	K	V	L	T	G	F	F	Q	S	L	N	I	S	.	.	.	.	.	.	.	.	E	T	Q	I	K	S	C	I	S	I	I	D	N	L	E	V	K	L	E	L	E	K	E	T	Q	K	I	I	D	F	V	K	I	D	G	S	V	D	D	V	L	D	K	L	K	H	L	S	Q	T	L	S	E	Q	F	N	L
Template Known Secondary structure											T	T	T	T			.	.	.	.	.	.	.	.								S	S	T	T	T	T					S	T	T	T	T				T	T					T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.									.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		S	T	E	D	H	R	V	A	E	R	F	E	V	Y	Y	K	G	I	E	L	A	N	G	F	H	E	L	T	D	A	R	E	Q	Q	Q	R	F	E	Q	D	N	R	K	R	A	A	R	.	G	L	P	Q	H	P	I	D	Q	N	L	I	E	A	L	K	V	G	M	P	D	C	S	G	V	A	L	G	V	D	R	L
Query Conservation																																																	.
Alig confidence																																		.															.
Template Conservation																																		.
Template Sequence		G	V	S	E	L	E	T	V	I	T	G	V	R	N	L	G	V	P	D	K	R	F	C	I	D	L	A	I	A	Y	Y	T	.	G	T	V	Y	E	T	T	L	I	G	H	E	A	L	G	S	I	C	S	G	G	R	Y	E	E	L	V	G	T	F	I	G	E	K	X	P	G	V	G	I	S	I	G	L	T	R	L
Template Known Secondary structure																T	T			G	G	G					T	T						.									T	T		G	G	G			S	S						S	S	S	S		T	T	T	T	S
Template Predicted Secondary structure																																		.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	L	A	L	G	A	E	T	L	A	E	V	I	A	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	R	L	L	K	A	G	I	L	N	T	L	P	P	T	P
Template Known Secondary structure								T	T		S					S
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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