Job Description P0A8N7 Confidence 98.60% Date Thu Jan 5 11:08:21 GMT 2012 Rank 77 Aligned Residues 125 % Identity 13% Template c3ikmC_ PDB info PDB header:transferase Chain: C: PDB Molecule:dna polymerase subunit gamma-2; PDBTitle: crystal structure of human mitochondrial dna polymerase2 holoenzyme Resolution 3.24 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	Q	P	S	A	S	I	P	N	L	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H	M	K	R	L	L
Query Conservation
Alig confidence										.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	G	P	L	G	V	E	.	.	.	.	L	R	K	N	L	A	A	E	W	W	T	S	V	V	V	F	R	E	Q	V	F	P	V	D	A	L	H	H	K	P	.	.	.	.	.	.	.	.	.	.	.	G	P	L	L	P	G	D	S	A	F	R	S	G	K	L	R	E	N	L	L	H	G	A	L	E	H	Y
Template Known Secondary structure										.	.	.	.																S	S			B							S				.	.	.	.	.	.	.	.	.	.	.			S	S	S	S				S	S				S		S
Template Predicted Secondary structure										.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.												.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		86	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.							.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.																		.	.	.	.	.	.																	.	.
Query SS confidence							.	.	.	.	.	.	.	.																		.	.	.	.	.	.																	.	.
Query Sequence		V	A	G	C	G	.	.	.	.	.	.	.	.	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	Y	.	.	.	.	.	.	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	.	.	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P	A	A	E
Query Conservation							.	.	.	.	.	.	.	.																		.	.	.	.	.	.																	.	.
Alig confidence							.	.	.	.	.	.	.	.																		.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		V	N	C	L	D	L	V	N	K	R	L	P	Y	G	L	A	Q	I	G	V	C	F	H	P	V	F	D	T	K	Q	I	R	N	G	V	K	S	I	G	E	K	T	E	A	S	L	V	W	F	T	P	P	R	T	S	N	Q	W	L	D	F	W	L	R	H	R	L	Q	W	W	R	K	F	A	M	S
Template Known Secondary structure							G	G	G	S						B																S	S	S		S																	T	T																						S	S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions