Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8N7
Confidence100.00%DateThu Jan 5 11:08:21 GMT 2012
Rank19Aligned Residues280
% Identity19%Templatec3i7fA_
PDB info PDB header:ligaseChain: A: PDB Molecule:aspartyl-trna synthetase; PDBTitle: aspartyl trna synthetase from entamoeba histolytica
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  WQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLV
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Template Sequence  LRTVTNIAIFRIQSACCGLFREFLTSQKFVEIHTPKL. . . . . . . . . . . . . . . . . . . . . . . . . . IAYLAQSPQLYKQMAIM
Template Known Secondary structure  TTSTT




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   231........240.........250.........260....... ..270.........280....
 
   87..90.........100...... ...110.........120.. .......130.........140.........150........
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Query Sequence  AGCGPVFQLCRSFRNEEMGR. YHNPEFTMLEWYRPHY. DMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLE. . . . . .
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Template Sequence  GDFRKVFEVGPVFRAENSNTRRHLTEFEGLDIEMEIVENYHECIDVMEKLFTFIFDEIPKRFPDELKVIRKQYPFEDLIY
Template Known Secondary structure  TT




S


SSS

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   304.....310.........320.........330.........340.........350.........360.........370.........380...
 
   159160.........170.........180.........190.........200.........210.........220... ......230.......
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Query Sequence  IDPLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQASLA. QISTEDHRVAERFE
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Template Sequence  RPFLRLTYKEAIEMLRASGET. . IGDYDDFTTPQEVKLGELIKAKYNTD. FYILDKFPAAIRPFYTMPDIDDPNYSNSYD
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BGGGS
TTB
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   384.....390.........400.... .....410.........420.........430 .........440.........450.........460
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  VYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEV
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Template Sequence  VFVRGQEITSGAQRIHDPEFLMKRCIEKGVDPAT. . . . . . . . LKDYIESFRFGSWPHAGCGIGLERITMLYLGIPNIRKV
Template Known Secondary structure  TT


TT

GGG........GTTSS



TT
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   461........470.........480.........490.... .....500.........510.........520.........530..
 
   318.320...
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Query Sequence  IAFSVD
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Template Sequence  TLFPRD
Template Known Secondary structure  SSS

B
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   533.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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