Job Description P0A8N7 Confidence 98.89% Date Thu Jan 5 11:08:21 GMT 2012 Rank 75 Aligned Residues 131 % Identity 17% Template c3errB_ PDB info PDB header:ligase Chain: B: PDB Molecule:fusion protein of microtubule binding domain from PDBTitle: microtubule binding domain from mouse cytoplasmic dynein as2 a fusion with seryl-trna synthetase Resolution 2.27 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		P	N	L	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H	M	K	R	L	L	V	A	G	C	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																											.																																				.	.	.
Template Conservation																																											.
Template Sequence		D	L	A	L	Y	E	L	A	L	L	R	F	A	M	D	F	M	A	R	R	G	F	L	P	M	T	L	P	S	Y	A	R	E	K	A	F	L	G	T	G	H	.	F	P	A	Y	R	D	Q	V	W	A	I	A	E	T	D	L	Y	L	T	G	T	A	E	V	V	L	N	A	L	H	S	G	E	I	L	P	Y	E
Template Known Secondary structure																					T	T								S											T		.	T	T	T	T	G	G	G					T	T	S	S					S	S	T								T	T	T					G	G
Template Predicted Secondary structure																																											.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
						91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																		.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence		.	.	.	.																		.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		.	.	.	.	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	Y	.	.	.	.	.	.	.	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	.	.	.	.	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P	A	A	E
Query Conservation		.	.	.	.																		.	.	.	.	.	.	.																	.	.	.	.
Alig confidence		.	.	.	.																		.	.	.	.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		A	L	P	L	R	Y	A	G	Y	A	P	A	F	R	S	E	A	G	S	F	G	K	D	V	R	G	L	M	R	V	H	Q	F	H	K	V	E	Q	Y	V	L	T	E	A	S	L	E	A	S	D	R	A	F	Q	E	L	L	E	N	A	E	E	I	L	R	L	L	E	L	P
Template Known Secondary structure		G		S															S			S	S	S		S	S	S	S	S		S													S																							T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions